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Difference between revisions of "TSS:Hg 232389.1"

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Line 5: Line 5:
 
|distance=-52
 
|distance=-52
 
|distance_to_tss=23
 
|distance_to_tss=23
|end=74151248
+
|end=75782813
 
|end_of_center_position=75782813
 
|end_of_center_position=75782813
 
|entrez_id=132
 
|entrez_id=132
Line 24: Line 24:
 
|num_trans=3
 
|num_trans=3
 
|species=human
 
|species=human
|start=74151239
+
|start=75782812
 
|start_of_center_position=75782812
 
|start_of_center_position=75782812
|strand=-
+
|strand=+
 
|transcript_name=ENST00000372499.5 NM_032024 AF267860
 
|transcript_name=ENST00000372499.5 NM_032024 AF267860
|tss_classification=yes
+
|tss_classification=no
 
|tss_id=hg_232389.1
 
|tss_id=hg_232389.1
 
|tss_score=1
 
|tss_score=1
 
|uniprot_id=Q9H2I8
 
|uniprot_id=Q9H2I8
 
}}
 
}}

Revision as of 08:36, 14 July 2021

Basic information about the TSS


TSS ID:hg_232389.1
Species:human
Chr:chr10
TSS Classification:no
Start:75782812
End:75782813
Strand:+
TSS Score:1
Start of the center position in the TSS region:75782812
End of the center position in the TSS region:75782813



Gene and protein annotation


Transcript_name:ENST00000372499.5 NM_032024 AF267860
Distance:-52
GeneID:83938
HGNC/MGI_ID:HGNC:23405
UniProt_ID:Q9H2I8
Gene_name:leucine rich melanocyte differentiation associated
Gene_symbol:LRMDA
Gene_synonyms:CDA017 OCA7
Gene_source:HGNC:23405



Transcript annotation


Transcript_name:ENST00000372499.5 NM_032024 AF267860
Distance:-52
Num_trans:3
All_trans:ENST00000372499.5:-52 NM_032024:-52 AF267860:-52



TATA-Box annotation


Distance to TSS:23
Nearest PromoterID:NM_001369123
Entrez ID:132
Nearest Unigene:Hs.656586
Nearest Refseq:NM_001123
Nearest Ensembl:ENSG00000156110
Gene Name:leucine rich melanocyte differentiation associated
Gene Alias:AK
Gene Description:adenosine kinase
Gene Type:protein-coding
CpG%:0.06
GC%:0.631841
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):