Difference between revisions of "TSS:Hg 232485.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance=-9 | |distance=-9 | ||
|distance_to_tss=16 | |distance_to_tss=16 | ||
| − | |end= | + | |end=97738553 |
|end_of_center_position=97738553 | |end_of_center_position=97738553 | ||
|entrez_id=84458 | |entrez_id=84458 | ||
| Line 25: | Line 25: | ||
|num_trans=14 | |num_trans=14 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=97738552 |
|start_of_center_position=97738552 | |start_of_center_position=97738552 | ||
| − | |strand= | + | |strand=+ |
|transcript_name=AL834235 | |transcript_name=AL834235 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_232485.1 | |tss_id=hg_232485.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 08:38, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 97738552 |
|---|---|
| End of the center position in the TSS region: | 97738553 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AL834235 |
|---|---|
| Distance: | -9 |
| Num_trans: | 14 |
| All_trans: | AL834235:-9 LF345644:24 MA581221:24 NM_001002261:-76 LF345643:-158 MA581220:-158 LF345645:259 MA581222:259 LF345642:-295 MA581219:-295 LF345646:338 MA581223:338 LF345641:-473 MA581218:-473 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NM_001346516 |
| Entrez ID: | 84458 |
| Nearest Unigene: | Hs.427927 |
| Nearest Refseq: | NM_015652 |
| Nearest Ensembl: | ENSG00000196233 |
| Gene Name: | zinc finger FYVE-type containing 27 |
| Gene Alias: | C10orf12|MLR2 |
| Gene Description: | ligand dependent nuclear receptor corepressor |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
