Difference between revisions of "TSS:Hg 233232.1"
From referenceTSS
| Line 5: | Line 5: | ||
|Trk-A= | |Trk-A= | ||
|all_trans=ENST00000624470.2:-82 | |all_trans=ENST00000624470.2:-82 | ||
| − | |chr= | + | |chr=chr11 |
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-82 | |distance=-82 | ||
|distance_to_tss=-79 | |distance_to_tss=-79 | ||
| − | |end= | + | |end=58214827 |
|end_of_center_position=58214827 | |end_of_center_position=58214827 | ||
|entrez_id=4914 | |entrez_id=4914 | ||
| Line 29: | Line 29: | ||
|p140-TrkA= | |p140-TrkA= | ||
|species=human | |species=human | ||
| − | |start= | + | |start=58214826 |
|start_of_center_position=58214826 | |start_of_center_position=58214826 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000624470.2 | |transcript_name=ENST00000624470.2 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_233232.1 | |tss_id=hg_233232.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q8NH92 | |uniprot_id=Q8NH92 | ||
}} | }} | ||
Revision as of 08:56, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 58214826 |
|---|---|
| End of the center position in the TSS region: | 58214827 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000624470.2 |
|---|---|
| Distance: | -82 |
| Num_trans: | 1 |
| All_trans: | ENST00000624470.2:-82 |
TATA-Box annotation
| Distance to TSS: | -79 |
|---|---|
| Nearest PromoterID: | NM_001007792 |
| Entrez ID: | 4914 |
| Nearest Unigene: | Hs.406293 |
| Nearest Refseq: | NM_002529 |
| Nearest Ensembl: | ENSG00000198400 |
| Gene Name: | olfactory receptor family 1 subfamily S member 1 |
| Gene Alias: | MTC|TRK|TRK1|TRKA|Trk-A|p140-TrkA |
| Gene Description: | neurotrophic receptor tyrosine kinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
