Difference between revisions of "TSS:Hg 233563.1"
From referenceTSS
| Line 4: | Line 4: | ||
|PPP1A= | |PPP1A= | ||
|all_trans=AK294569:-2 | |all_trans=AK294569:-2 | ||
| − | |chr= | + | |chr=chr1 |
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=-2 | |distance=-2 | ||
|distance_to_tss=29 | |distance_to_tss=29 | ||
| − | |end= | + | |end=169803157 |
|end_of_center_position=169803157 | |end_of_center_position=169803157 | ||
|entrez_id=5499 | |entrez_id=5499 | ||
| Line 27: | Line 27: | ||
|num_trans=1 | |num_trans=1 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=169803156 |
|start_of_center_position=169803156 | |start_of_center_position=169803156 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK294569 | |transcript_name=AK294569 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_233563.1 | |tss_id=hg_233563.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=B4DGF2 | |uniprot_id=B4DGF2 | ||
}} | }} | ||
Revision as of 09:03, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 169803156 |
|---|---|
| End of the center position in the TSS region: | 169803157 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK294569 |
|---|---|
| Distance: | -2 |
| Num_trans: | 1 |
| All_trans: | AK294569:-2 |
TATA-Box annotation
| Distance to TSS: | 29 |
|---|---|
| Nearest PromoterID: | NM_002708 |
| Entrez ID: | 5499 |
| Nearest Unigene: | Hs.183994 |
| Nearest Refseq: | NM_002708 |
| Nearest Ensembl: | ENSG00000172531 |
| Gene Name: | chromosome 1 open reading frame 112 |
| Gene Alias: | PP-1A|PP1A|PP1alpha|PPP1A |
| Gene Description: | protein phosphatase 1 catalytic subunit alpha |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
