Difference between revisions of "TSS:Hg 233656.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=LF320209:-9 MA555786:-9 LF320208:-170 MA555785:-170 ENST00000567904.1:388 BC039325:390 | |all_trans=LF320209:-9 MA555786:-9 LF320208:-170 MA555785:-170 ENST00000567904.1:388 BC039325:390 | ||
| − | |chr= | + | |chr=chr1 |
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=-9 | |distance=-9 | ||
|distance_to_tss=-12 | |distance_to_tss=-12 | ||
| − | |end= | + | |end=179954838 |
|end_of_center_position=179954833 | |end_of_center_position=179954833 | ||
|entrez_id=8495 | |entrez_id=8495 | ||
| Line 24: | Line 24: | ||
|num_trans=6 | |num_trans=6 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=179954827 |
|start_of_center_position=179954832 | |start_of_center_position=179954832 | ||
| − | |strand= | + | |strand=- |
|transcript_name=LF320209 MA555786 | |transcript_name=LF320209 MA555786 | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 09:05, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 179954832 |
|---|---|
| End of the center position in the TSS region: | 179954833 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | LF320209 MA555786 |
|---|---|
| Distance: | -9 |
| Num_trans: | 6 |
| All_trans: | LF320209:-9 MA555786:-9 LF320208:-170 MA555785:-170 ENST00000567904.1:388 BC039325:390 |
TATA-Box annotation
| Distance to TSS: | -12 |
|---|---|
| Nearest PromoterID: | NM_001351853 |
| Entrez ID: | 8495 |
| Nearest Unigene: | Hs.655714 |
| Nearest Refseq: | NM_003621 |
| Nearest Ensembl: | ENSG00000166387 |
| Gene Name: | PPFIBP2 |
| Gene Alias: | Cclp1 |
| Gene Description: | PPFIA binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
