Difference between revisions of "TSS:Hg 233698.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000367501.7:9 NM_001105518:-11 AK127980:51 BC030781:88 ENST00000367500.9:96 NM_017673:96 AK315802:122 AK291443:222 ENST00000450350.1:411 | |all_trans=ENST00000367501.7:9 NM_001105518:-11 AK127980:51 BC030781:88 ENST00000367500.9:96 NM_017673:96 AK315802:122 AK291443:222 ENST00000450350.1:411 | ||
| − | |chr= | + | |chr=chr1 |
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=9 | |distance=9 | ||
|distance_to_tss=-317570 | |distance_to_tss=-317570 | ||
| − | |end= | + | |end=185157071 |
|end_of_center_position=185157071 | |end_of_center_position=185157071 | ||
|entrez_id=101928944 | |entrez_id=101928944 | ||
| Line 24: | Line 24: | ||
|num_trans=9 | |num_trans=9 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=185157070 |
|start_of_center_position=185157070 | |start_of_center_position=185157070 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000367501.7 | |transcript_name=ENST00000367501.7 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_233698.1 | |tss_id=hg_233698.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q5T5J6 | |uniprot_id=Q5T5J6 | ||
}} | }} | ||
Revision as of 09:06, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 185157070 |
|---|---|
| End of the center position in the TSS region: | 185157071 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000367501.7 |
|---|---|
| Distance: | 9 |
| Num_trans: | 9 |
| All_trans: | ENST00000367501.7:9 NM_001105518:-11 AK127980:51 BC030781:88 ENST00000367500.9:96 NM_017673:96 AK315802:122 AK291443:222 ENST00000450350.1:411 |
TATA-Box annotation
| Distance to TSS: | -317570 |
|---|---|
| Nearest PromoterID: | NR_120570 |
| Entrez ID: | 101928944 |
| Nearest Unigene: | Hs.547927 |
| Nearest Refseq: | NR_120570 |
| Nearest Ensembl: | ENSG00000255178 |
| Gene Name: | SWT1 RNA endoribonuclease homolog |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 2720 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.308458 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
