Difference between revisions of "TSS:Hg 233703.1"
From referenceTSS
| Line 2: | Line 2: | ||
|PRO1385= | |PRO1385= | ||
|all_trans=ENST00000459929.5:4 AK023123:4 AF205218:23 AF161553:32 ENST00000367498.8:34 NM_006469:34 AJ012449:34 BC067739:48 AB020657:-57 DQ443528:59 AK292431:198 | |all_trans=ENST00000459929.5:4 AK023123:4 AF205218:23 AF161553:32 ENST00000367498.8:34 NM_006469:34 AJ012449:34 BC067739:48 AB020657:-57 DQ443528:59 AK292431:198 | ||
| − | |chr= | + | |chr=chr1 |
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=4 | |distance=4 | ||
|distance_to_tss=30523 | |distance_to_tss=30523 | ||
| − | |end= | + | |end=185317279 |
|end_of_center_position=185317278 | |end_of_center_position=185317278 | ||
|entrez_id=79608 | |entrez_id=79608 | ||
| Line 25: | Line 25: | ||
|num_trans=11 | |num_trans=11 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=185317276 |
|start_of_center_position=185317277 | |start_of_center_position=185317277 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000459929.5 AK023123 | |transcript_name=ENST00000459929.5 AK023123 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_233703.1 | |tss_id=hg_233703.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 09:06, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 185317277 |
|---|---|
| End of the center position in the TSS region: | 185317278 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000459929.5 AK023123 |
|---|---|
| Distance: | 4 |
| Num_trans: | 11 |
| All_trans: | ENST00000459929.5:4 AK023123:4 AF205218:23 AF161553:32 ENST00000367498.8:34 NM_006469:34 AJ012449:34 BC067739:48 AB020657:-57 DQ443528:59 AK292431:198 |
TATA-Box annotation
| Distance to TSS: | 30523 |
|---|---|
| Nearest PromoterID: | NM_001346693 |
| Entrez ID: | 79608 |
| Nearest Unigene: | Hs.231850 |
| Nearest Refseq: | NM_024557 |
| Nearest Ensembl: | ENSG00000166405 |
| Gene Name: | influenza virus NS1A binding protein |
| Gene Alias: | AYST720|PRO1385 |
| Gene Description: | RIC3 acetylcholine receptor chaperone |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.308458 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
