Difference between revisions of "TSS:Hg 233731.1"
From referenceTSS
| Line 5: | Line 5: | ||
|all_trans=ENST00000528319.1:2 LP764882:2 AK057189:2 NM_001143837:56 | |all_trans=ENST00000528319.1:2 LP764882:2 AK057189:2 NM_001143837:56 | ||
|bG120K12.3= | |bG120K12.3= | ||
| − | |chr= | + | |chr=chr11 |
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
|distance=2 | |distance=2 | ||
|distance_to_tss=31 | |distance_to_tss=31 | ||
| − | |end= | + | |end=89589613 |
|end_of_center_position=89589613 | |end_of_center_position=89589613 | ||
|entrez_id=81627 | |entrez_id=81627 | ||
| Line 28: | Line 28: | ||
|num_trans=4 | |num_trans=4 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=89589612 |
|start_of_center_position=89589612 | |start_of_center_position=89589612 | ||
| − | |strand= | + | |strand=- |
|transcript_name=ENST00000528319.1 LP764882 AK057189 | |transcript_name=ENST00000528319.1 LP764882 AK057189 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_233731.1 | |tss_id=hg_233731.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=B3KQ17 | |uniprot_id=B3KQ17 | ||
}} | }} | ||
Revision as of 09:07, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 89589612 |
|---|---|
| End of the center position in the TSS region: | 89589613 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000528319.1 LP764882 AK057189 |
|---|---|
| Distance: | 2 |
| Num_trans: | 4 |
| All_trans: | ENST00000528319.1:2 LP764882:2 AK057189:2 NM_001143837:56 |
TATA-Box annotation
| Distance to TSS: | 31 |
|---|---|
| Nearest PromoterID: | NM_030934 |
| Entrez ID: | 81627 |
| Nearest Unigene: | Hs.107149 |
| Nearest Refseq: | NM_030934 |
| Nearest Ensembl: | ENSG00000121486 |
| Gene Name: | NADPH oxidase 4 |
| Gene Alias: | C1orf25|MST070|MSTP070|TRM1L|bG120K12.3 |
| Gene Description: | tRNA methyltransferase 1 like |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
