Difference between revisions of "TSS:Hg 233751.1"
From referenceTSS
| Line 10: | Line 10: | ||
|distance=16 | |distance=16 | ||
|distance_to_tss=26 | |distance_to_tss=26 | ||
| − | |end= | + | |end=19485559 |
|end_of_center_position=19485557 | |end_of_center_position=19485557 | ||
|entrez_id=5743 | |entrez_id=5743 | ||
| Line 30: | Line 30: | ||
|num_trans=15 | |num_trans=15 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=19485554 |
|start_of_center_position=19485556 | |start_of_center_position=19485556 | ||
| − | |strand= | + | |strand=- |
|tata_box=50(CTTTTTATAAGA,+,0.00) | |tata_box=50(CTTTTTATAAGA,+,0.00) | ||
|transcript_name=ENST00000264202.8 ENST00000459967.6 NM_004930 NM_001206541 NM_001206540 NM_001313932 | |transcript_name=ENST00000264202.8 ENST00000459967.6 NM_004930 NM_001206541 NM_001206540 NM_001313932 | ||
Revision as of 09:07, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 19485556 |
|---|---|
| End of the center position in the TSS region: | 19485557 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000264202.8 ENST00000459967.6 NM_004930 NM_001206541 NM_001206540 NM_001313932 |
|---|---|
| Distance: | 16 |
| Num_trans: | 15 |
| All_trans: | ENST00000264202.8:16 ENST00000459967.6:16 NM_004930:16 NM_001206541:16 NM_001206540:16 NM_001313932:16 ENST00000482808.2:18 ENST00000375144.6:18 ENST00000674432.1:18 ENST00000264203.7:42 AK125085:42 BC107752:68 ENST00000375142.5:70 ENST00000674449.1:78 AK313113:78 |
TATA-Box annotation
| Distance to TSS: | 26 |
|---|---|
| Nearest PromoterID: | NM_000963 |
| Entrez ID: | 5743 |
| Nearest Unigene: | Hs.196384 |
| Nearest Refseq: | NM_000963 |
| Nearest Ensembl: | ENSG00000073756 |
| Gene Name: | capping actin protein of muscle Z-line subunit beta |
| Gene Alias: | COX-2|COX2|GRIPGHS|PGG/HS|PGHS-2|PHS-2|hCox-2 |
| Gene Description: | prostaglandin-endoperoxide synthase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 50(CTTTTTATAAGA,+,0.00) |
