Difference between revisions of "TSS:Hg 234463.1"
From referenceTSS
| Line 10: | Line 10: | ||
|distance=246 | |distance=246 | ||
|distance_to_tss=1891 | |distance_to_tss=1891 | ||
| − | |end= | + | |end=56104291 |
|end_of_center_position=56104291 | |end_of_center_position=56104291 | ||
|entrez_id=3178 | |entrez_id=3178 | ||
| Line 31: | Line 31: | ||
|num_trans=19 | |num_trans=19 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=56104290 |
|start_of_center_position=56104290 | |start_of_center_position=56104290 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000552766.5 | |transcript_name=ENST00000552766.5 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_234463.1 | |tss_id=hg_234463.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=F8VR77 | |uniprot_id=F8VR77 | ||
}} | }} | ||
Revision as of 09:24, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 56104290 |
|---|---|
| End of the center position in the TSS region: | 56104291 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000552766.5 |
|---|---|
| Distance: | 246 |
| Num_trans: | 19 |
| All_trans: | ENST00000552766.5:246 BC019222:251 U87954:260 ENST00000303305.11:268 NM_006191:268 AK291796:275 BC007561:314 BC001951:328 BC011718:341 BC032111:347 BC087732:347 BC072007:348 U59435:350 BC069786:375 CU675707:447 AB464072:447 DQ893446:447 DQ896751:447 KJ891745:447 |
TATA-Box annotation
| Distance to TSS: | 1891 |
|---|---|
| Nearest PromoterID: | NM_002136 |
| Entrez ID: | 3178 |
| Nearest Unigene: | Hs.546261 |
| Nearest Refseq: | NM_002136 |
| Nearest Ensembl: | ENSG00000135486 |
| Gene Name: | proliferation-associated 2G4 |
| Gene Alias: | ALS19|ALS20|HNRPA1|HNRPA1L3|IBMPFD3|UP 1|hnRNP A1|hnRNP-A1 |
| Gene Description: | heterogeneous nuclear ribonucleoprotein A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
