Difference between revisions of "TSS:Hg 234468.1"
From referenceTSS
| Line 10: | Line 10: | ||
|distance=-387 | |distance=-387 | ||
|distance_to_tss=3208 | |distance_to_tss=3208 | ||
| − | |end= | + | |end=56159729 |
|end_of_center_position=56159722 | |end_of_center_position=56159722 | ||
|entrez_id=3178 | |entrez_id=3178 | ||
| Line 31: | Line 31: | ||
|num_trans=2 | |num_trans=2 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=56159713 |
|start_of_center_position=56159721 | |start_of_center_position=56159721 | ||
| − | |strand= | + | |strand=- |
|transcript_name=LF317690 MA553267 | |transcript_name=LF317690 MA553267 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 09:24, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 56159721 |
|---|---|
| End of the center position in the TSS region: | 56159722 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | LF317690 MA553267 |
|---|---|
| Distance: | -387 |
| Num_trans: | 2 |
| All_trans: | LF317690:-387 MA553267:-387 |
TATA-Box annotation
| Distance to TSS: | 3208 |
|---|---|
| Nearest PromoterID: | NM_002136 |
| Entrez ID: | 3178 |
| Nearest Unigene: | Hs.546261 |
| Nearest Refseq: | NM_002136 |
| Nearest Ensembl: | ENSG00000135486 |
| Gene Name: | HNRNPA1 |
| Gene Alias: | ALS19|ALS20|HNRPA1|HNRPA1L3|IBMPFD3|UP 1|hnRNP A1|hnRNP-A1 |
| Gene Description: | heterogeneous nuclear ribonucleoprotein A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
