Difference between revisions of "TSS:Hg 235019.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000327359.7:-2 AK295579:-2 NM_001242786:-89 NM_001242787:-89 LF385530:-89 MA621107:-89 AK294899:-89 ENST00000440513.7:-101 ENST00000550692.1:-101 | |all_trans=ENST00000327359.7:-2 AK295579:-2 NM_001242786:-89 NM_001242787:-89 LF385530:-89 MA621107:-89 AK294899:-89 ENST00000440513.7:-101 ENST00000550692.1:-101 | ||
| − | |chr= | + | |chr=chr14 |
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=-2 | |distance=-2 | ||
|distance_to_tss=35901 | |distance_to_tss=35901 | ||
| − | |end= | + | |end=105315488 |
|end_of_center_position=105315488 | |end_of_center_position=105315488 | ||
|entrez_id=100874096 | |entrez_id=100874096 | ||
| Line 24: | Line 24: | ||
|num_trans=9 | |num_trans=9 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=105315487 |
|start_of_center_position=105315487 | |start_of_center_position=105315487 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000327359.7 AK295579 | |transcript_name=ENST00000327359.7 AK295579 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_235019.1 | |tss_id=hg_235019.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q92994 | |uniprot_id=Q92994 | ||
}} | }} | ||
Revision as of 09:36, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 105315487 |
|---|---|
| End of the center position in the TSS region: | 105315488 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000327359.7 AK295579 |
|---|---|
| Distance: | -2 |
| Num_trans: | 9 |
| All_trans: | ENST00000327359.7:-2 AK295579:-2 NM_001242786:-89 NM_001242787:-89 LF385530:-89 MA621107:-89 AK294899:-89 ENST00000440513.7:-101 ENST00000550692.1:-101 |
TATA-Box annotation
| Distance to TSS: | 35901 |
|---|---|
| Nearest PromoterID: | NR_046663 |
| Entrez ID: | 100874096 |
| Nearest Unigene: | Hs.578066 |
| Nearest Refseq: | NR_046663 |
| Nearest Ensembl: | ENSG00000229918 |
| Gene Name: | BRF1 RNA polymerase III transcription initiation factor subunit; ZFP36 ring finger protein like 1 |
| Gene Alias: | - |
| Gene Description: | DOCK9 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
