Difference between revisions of "TSS:Hg 236392.1"
From referenceTSS
| Line 2: | Line 2: | ||
|FP977= | |FP977= | ||
|all_trans=ENST00000395806.5:10 ENST00000395807.2:10 ENST00000395811.9:10 KF724384:10 LF384741:10 MA620318:10 BC136479:19 AB098507:43 AB384537:97 ENST00000341712.8:99 AY296247:99 AB189741:99 ENST00000577514.5:-205 ENST00000651222.2:-293 NM_001364716:-293 NM_201274:-293 NM_015134:-293 | |all_trans=ENST00000395806.5:10 ENST00000395807.2:10 ENST00000395811.9:10 KF724384:10 LF384741:10 MA620318:10 BC136479:19 AB098507:43 AB384537:97 ENST00000341712.8:99 AY296247:99 AB189741:99 ENST00000577514.5:-205 ENST00000651222.2:-293 NM_001364716:-293 NM_201274:-293 NM_015134:-293 | ||
| − | |chr= | + | |chr=chr17 |
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=10 | |distance=10 | ||
|distance_to_tss=94182 | |distance_to_tss=94182 | ||
| − | |end= | + | |end=17042750 |
|end_of_center_position=17042750 | |end_of_center_position=17042750 | ||
|entrez_id=79726 | |entrez_id=79726 | ||
| Line 26: | Line 26: | ||
|p90-120= | |p90-120= | ||
|species=human | |species=human | ||
| − | |start= | + | |start=17042749 |
|start_of_center_position=17042749 | |start_of_center_position=17042749 | ||
| − | |strand= | + | |strand=+ |
|transcript_name=ENST00000395806.5 ENST00000395807.2 ENST00000395811.9 KF724384 LF384741 MA620318 | |transcript_name=ENST00000395806.5 ENST00000395807.2 ENST00000395811.9 KF724384 LF384741 MA620318 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_236392.1 | |tss_id=hg_236392.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=A8MZF8 Q6WCQ1 | |uniprot_id=A8MZF8 Q6WCQ1 | ||
}} | }} | ||
Revision as of 10:09, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17042749 |
|---|---|
| End of the center position in the TSS region: | 17042750 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000395806.5 ENST00000395807.2 ENST00000395811.9 KF724384 LF384741 MA620318 |
|---|---|
| Distance: | 10 |
| Num_trans: | 17 |
| All_trans: | ENST00000395806.5:10 ENST00000395807.2:10 ENST00000395811.9:10 KF724384:10 LF384741:10 MA620318:10 BC136479:19 AB098507:43 AB384537:97 ENST00000341712.8:99 AY296247:99 AB189741:99 ENST00000577514.5:-205 ENST00000651222.2:-293 NM_001364716:-293 NM_201274:-293 NM_015134:-293 |
TATA-Box annotation
| Distance to TSS: | 94182 |
|---|---|
| Nearest PromoterID: | NM_030581 |
| Entrez ID: | 79726 |
| Nearest Unigene: | Hs.280951 |
| Nearest Refseq: | NM_030581 |
| Nearest Ensembl: | ENSG00000103091 |
| Gene Name: | myosin phosphatase Rho interacting protein |
| Gene Alias: | CDW12|FP977|p90-120 |
| Gene Description: | WD repeat domain 59 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
