Difference between revisions of "TSS:Hg 236500.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance=120 | |distance=120 | ||
|distance_to_tss=-10 | |distance_to_tss=-10 | ||
| − | |end= | + | |end=30235818 |
|end_of_center_position=30235818 | |end_of_center_position=30235818 | ||
|entrez_id=23164 | |entrez_id=23164 | ||
| Line 28: | Line 28: | ||
|p116Rip= | |p116Rip= | ||
|species=human | |species=human | ||
| − | |start= | + | |start=30235817 |
|start_of_center_position=30235817 | |start_of_center_position=30235817 | ||
| − | |strand= | + | |strand=- |
|transcript_name=ENST00000394821.2 AK308014 | |transcript_name=ENST00000394821.2 AK308014 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 10:11, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 30235817 |
|---|---|
| End of the center position in the TSS region: | 30235818 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000394821.2 AK308014 |
|---|---|
| Distance: | 120 |
| Num_trans: | 7 |
| All_trans: | ENST00000394821.2:120 AK308014:120 ENST00000650711.1:121 NM_001045:121 AK313166:121 ENST00000261707.7:-150 ENST00000401766.6:-184 |
TATA-Box annotation
| Distance to TSS: | -10 |
|---|---|
| Nearest PromoterID: | NM_015134 |
| Entrez ID: | 23164 |
| Nearest Unigene: | Hs.462341 |
| Nearest Refseq: | NM_015134 |
| Nearest Ensembl: | ENSG00000133030 |
| Gene Name: | solute carrier family 6 member 4 |
| Gene Alias: | M-RIP|MRIP|RHOIP3|RIP3|p116Rip |
| Gene Description: | myosin phosphatase Rho interacting protein |
| Gene Type: | protein-coding |
| CpG%: | 0.2 |
| GC%: | 0.850746 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
