Difference between revisions of "TSS:Hg 236611.1"
From referenceTSS
| Line 11: | Line 11: | ||
|distance=-93 | |distance=-93 | ||
|distance_to_tss=-121 | |distance_to_tss=-121 | ||
| − | |end= | + | |end=41624116 |
|end_of_center_position=41624108 | |end_of_center_position=41624108 | ||
|entrez_id=6532 | |entrez_id=6532 | ||
| Line 31: | Line 31: | ||
|num_trans=20 | |num_trans=20 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=41624098 |
|start_of_center_position=41624107 | |start_of_center_position=41624107 | ||
|strand=- | |strand=- | ||
Revision as of 10:14, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 41624107 |
|---|---|
| End of the center position in the TSS region: | 41624108 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | EF608068 |
|---|---|
| Distance: | -93 |
| Num_trans: | 20 |
| All_trans: | EF608068:-93 ENST00000493253.5:-180 BX647923:-180 CU687210:-188 ENST00000577817.3:-348 AB528302:-395 DQ891101:-398 DQ894283:-398 ENST00000540235.5:-425 BC072018:-425 BC072019:-439 BC011901:-441 X62571:-441 BC000159:-443 BC056421:-443 ENST00000311208.13:-459 ENST00000491673.1:-459 NM_000422:-459 AK304373:-459 AK095342:-461 |
TATA-Box annotation
| Distance to TSS: | -121 |
|---|---|
| Nearest PromoterID: | NM_001045 |
| Entrez ID: | 6532 |
| Nearest Unigene: | Hs.29792 |
| Nearest Refseq: | NM_001045 |
| Nearest Ensembl: | ENSG00000108576 |
| Gene Name: | keratin 17 |
| Gene Alias: | 5-HTT|5-HTTLPR|5HTT|HTT|OCD1|SERT|SERT1|hSERT |
| Gene Description: | solute carrier family 6 member 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
