Difference between revisions of "TSS:Hg 237222.1"
From referenceTSS
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|UTR= | |UTR= | ||
|all_trans=BC044225:-56 NM_001103167:-68 BC029904:-68 ENST00000403352.1:-294 ENST00000403903.7:-391 AK096830:-391 | |all_trans=BC044225:-56 NM_001103167:-68 BC029904:-68 ENST00000403352.1:-294 ENST00000403903.7:-391 AK096830:-391 | ||
− | |chr= | + | |chr=chr19 |
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=-56 | |distance=-56 | ||
|distance_to_tss=-658 | |distance_to_tss=-658 | ||
− | |end= | + | |end=10309489 |
|end_of_center_position=10309489 | |end_of_center_position=10309489 | ||
|entrez_id=8170 | |entrez_id=8170 | ||
Line 29: | Line 29: | ||
|num_trans=6 | |num_trans=6 | ||
|species=human | |species=human | ||
− | |start= | + | |start=10309488 |
|start_of_center_position=10309488 | |start_of_center_position=10309488 | ||
− | |strand= | + | |strand=- |
|transcript_name=BC044225 | |transcript_name=BC044225 | ||
− | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_237222.1 | |tss_id=hg_237222.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} |
Revision as of 10:28, 14 July 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 10309488 |
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End of the center position in the TSS region: | 10309489 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | BC044225 |
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Distance: | -56 |
Num_trans: | 6 |
All_trans: | BC044225:-56 NM_001103167:-68 BC029904:-68 ENST00000403352.1:-294 ENST00000403903.7:-391 AK096830:-391 |
TATA-Box annotation
Distance to TSS: | -658 |
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Nearest PromoterID: | NM_007163 |
Entrez ID: | 8170 |
Nearest Unigene: | Hs.710927 |
Nearest Refseq: | NM_007163 |
Nearest Ensembl: | ENSG00000132874 |
Gene Name: | zinc finger GATA like protein 1 |
Gene Alias: | HUT2|UT-A2|UT2|UTA|UTR|hUT-A6 |
Gene Description: | solute carrier family 14 member 2 |
Gene Type: | protein-coding |
CpG%: | 0 |
GC%: | 0.437811 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |