Difference between revisions of "TSS:Hg 237329.1"
From referenceTSS
| Line 5: | Line 5: | ||
|PPH= | |PPH= | ||
|all_trans=LF208143:239 MA443720:239 | |all_trans=LF208143:239 MA443720:239 | ||
| − | |chr= | + | |chr=chr19 |
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=239 | |distance=239 | ||
|distance_to_tss=-5307 | |distance_to_tss=-5307 | ||
| − | |end= | + | |end=17306649 |
|end_of_center_position=17306643 | |end_of_center_position=17306643 | ||
|entrez_id=102465436 | |entrez_id=102465436 | ||
| Line 28: | Line 28: | ||
|num_trans=2 | |num_trans=2 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=17306635 |
|start_of_center_position=17306642 | |start_of_center_position=17306642 | ||
|strand=- | |strand=- | ||
|transcript_name=LF208143 MA443720 | |transcript_name=LF208143 MA443720 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_237329.1 | |tss_id=hg_237329.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=A4UCS8 | |uniprot_id=A4UCS8 | ||
}} | }} | ||
Latest revision as of 10:30, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17306642 |
|---|---|
| End of the center position in the TSS region: | 17306643 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF208143 MA443720 |
|---|---|
| Distance: | 239 |
| Num_trans: | 2 |
| All_trans: | LF208143:239 MA443720:239 |
TATA-Box annotation
| Distance to TSS: | -5307 |
|---|---|
| Nearest PromoterID: | NR_106786 |
| Entrez ID: | 102465436 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_106786 |
| Nearest Ensembl: | ENSG00000274258 |
| Gene Name: | MIR6728 |
| Gene Alias: | hsa-mir-6728 |
| Gene Description: | microRNA 6728 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
