Difference between revisions of "TSS:Hg 238265.1"
From referenceTSS
| Line 2: | Line 2: | ||
|TMEPAI= | |TMEPAI= | ||
|all_trans=ENST00000357903.7:9 LF385141:-22 MA620718:-22 ENST00000346798.8:26 NM_001136129:26 NM_000484:26 NM_201414:26 NM_201413:26 NM_001204302:26 NM_001204301:26 NM_001204303:26 NM_001136130:26 NM_001385253:26 M35675:26 ENST00000348990.9:29 Y00264:29 AK297412:29 AK294534:29 AK298861:29 LF214042:30 MA449619:30 BC065529:45 BC065523:45 ENST00000354192.7:49 AF282245:49 ENST00000474136.5:50 BC004369:50 X06989:58 MA353526:90 AK297229:112 AK312326:112 ENST00000358918.7:129 ENST00000439274.6:142 HM005315:156 AB384791:171 EU832797:176 GQ129348:176 KJ901289:176 LF210650:-262 MA446227:-262 LF213391:321 MA448968:321 ENST00000359726.7:-330 NM_001136131:-330 LF385472:-330 MA621049:-330 AK296229:-330 | |all_trans=ENST00000357903.7:9 LF385141:-22 MA620718:-22 ENST00000346798.8:26 NM_001136129:26 NM_000484:26 NM_201414:26 NM_201413:26 NM_001204302:26 NM_001204301:26 NM_001204303:26 NM_001136130:26 NM_001385253:26 M35675:26 ENST00000348990.9:29 Y00264:29 AK297412:29 AK294534:29 AK298861:29 LF214042:30 MA449619:30 BC065529:45 BC065523:45 ENST00000354192.7:49 AF282245:49 ENST00000474136.5:50 BC004369:50 X06989:58 MA353526:90 AK297229:112 AK312326:112 ENST00000358918.7:129 ENST00000439274.6:142 HM005315:156 AB384791:171 EU832797:176 GQ129348:176 KJ901289:176 LF210650:-262 MA446227:-262 LF213391:321 MA448968:321 ENST00000359726.7:-330 NM_001136131:-330 LF385472:-330 MA621049:-330 AK296229:-330 | ||
| − | |chr= | + | |chr=chr21 |
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=9 | |distance=9 | ||
|distance_to_tss=79 | |distance_to_tss=79 | ||
| − | |end= | + | |end=26170798 |
|end_of_center_position=26170797 | |end_of_center_position=26170797 | ||
|entrez_id=56937 | |entrez_id=56937 | ||
| Line 25: | Line 25: | ||
|num_trans=47 | |num_trans=47 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=26170795 |
|start_of_center_position=26170796 | |start_of_center_position=26170796 | ||
| − | |strand= | + | |strand=- |
|transcript_name=ENST00000357903.7 | |transcript_name=ENST00000357903.7 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 10:53, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 26170796 |
|---|---|
| End of the center position in the TSS region: | 26170797 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000357903.7 |
|---|---|
| Distance: | 9 |
| Num_trans: | 47 |
| All_trans: | ENST00000357903.7:9 LF385141:-22 MA620718:-22 ENST00000346798.8:26 NM_001136129:26 NM_000484:26 NM_201414:26 NM_201413:26 NM_001204302:26 NM_001204301:26 NM_001204303:26 NM_001136130:26 NM_001385253:26 M35675:26 ENST00000348990.9:29 Y00264:29 AK297412:29 AK294534:29 AK298861:29 LF214042:30 MA449619:30 BC065529:45 BC065523:45 ENST00000354192.7:49 AF282245:49 ENST00000474136.5:50 BC004369:50 X06989:58 MA353526:90 AK297229:112 AK312326:112 ENST00000358918.7:129 ENST00000439274.6:142 HM005315:156 AB384791:171 EU832797:176 GQ129348:176 KJ901289:176 LF210650:-262 MA446227:-262 LF213391:321 MA448968:321 ENST00000359726.7:-330 NM_001136131:-330 LF385472:-330 MA621049:-330 AK296229:-330 |
TATA-Box annotation
| Distance to TSS: | 79 |
|---|---|
| Nearest PromoterID: | NM_020182 |
| Entrez ID: | 56937 |
| Nearest Unigene: | Hs.517155 |
| Nearest Refseq: | NM_020182 |
| Nearest Ensembl: | ENSG00000124225 |
| Gene Name: | amyloid beta precursor protein |
| Gene Alias: | STAG1|TMEPAI |
| Gene Description: | prostate transmembrane protein, androgen induced 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
