Difference between revisions of "TSS:Hg 238423.1"
From referenceTSS
| Line 9: | Line 9: | ||
|PN2= | |PN2= | ||
|all_trans=ENST00000446278.5:34 AF533530:34 ENST00000469607.3:36 AF533531:36 ENST00000462973.5:40 AF533529:40 | |all_trans=ENST00000446278.5:34 AF533530:34 ENST00000469607.3:36 AF533531:36 ENST00000462973.5:40 AF533529:40 | ||
| − | |chr= | + | |chr=chr2 |
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
|distance=34 | |distance=34 | ||
|distance_to_tss=-27 | |distance_to_tss=-27 | ||
| − | |end= | + | |end=1484629 |
|end_of_center_position=1484629 | |end_of_center_position=1484629 | ||
|entrez_id=351 | |entrez_id=351 | ||
| Line 32: | Line 32: | ||
|num_trans=6 | |num_trans=6 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=1484628 |
|start_of_center_position=1484628 | |start_of_center_position=1484628 | ||
| − | |strand= | + | |strand=+ |
|transcript_name=ENST00000446278.5 AF533530 | |transcript_name=ENST00000446278.5 AF533530 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_238423.1 | |tss_id=hg_238423.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=H7C1F5 | |uniprot_id=H7C1F5 | ||
}} | }} | ||
Revision as of 10:56, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1484628 |
|---|---|
| End of the center position in the TSS region: | 1484629 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000446278.5 AF533530 |
|---|---|
| Distance: | 34 |
| Num_trans: | 6 |
| All_trans: | ENST00000446278.5:34 AF533530:34 ENST00000469607.3:36 AF533531:36 ENST00000462973.5:40 AF533529:40 |
TATA-Box annotation
| Distance to TSS: | -27 |
|---|---|
| Nearest PromoterID: | NM_001204301 |
| Entrez ID: | 351 |
| Nearest Unigene: | Hs.434980 |
| Nearest Refseq: | NM_000484 |
| Nearest Ensembl: | ENSG00000142192 |
| Gene Name: | thyroid peroxidase |
| Gene Alias: | AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 |
| Gene Description: | amyloid beta precursor protein |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
