Difference between revisions of "TSS:Hg 240485.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000514000.5:-62 AF193052:-74 BC012125:-99 ENST00000356736.5:-107 ENST00000512657.5:-107 NM_001135146:-107 NM_001135147:122 ENST00000424970.6:170 AK304274:170 NM_022154:184 ENST00000394833.6:236 AB040120:236 | |all_trans=ENST00000514000.5:-62 AF193052:-74 BC012125:-99 ENST00000356736.5:-107 ENST00000512657.5:-107 NM_001135146:-107 NM_001135147:122 ENST00000424970.6:170 AK304274:170 NM_022154:184 ENST00000394833.6:236 AB040120:236 | ||
| − | |chr= | + | |chr=chr4 |
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-62 | |distance=-62 | ||
|distance_to_tss=27824 | |distance_to_tss=27824 | ||
| − | |end= | + | |end=102345375 |
|end_of_center_position=102345375 | |end_of_center_position=102345375 | ||
|entrez_id=105374297 | |entrez_id=105374297 | ||
| Line 24: | Line 24: | ||
|num_trans=12 | |num_trans=12 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=102345374 |
|start_of_center_position=102345374 | |start_of_center_position=102345374 | ||
| − | |strand= | + | |strand=- |
|transcript_name=ENST00000514000.5 | |transcript_name=ENST00000514000.5 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 11:43, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 102345374 |
|---|---|
| End of the center position in the TSS region: | 102345375 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000514000.5 |
|---|---|
| Distance: | -62 |
| Num_trans: | 12 |
| All_trans: | ENST00000514000.5:-62 AF193052:-74 BC012125:-99 ENST00000356736.5:-107 ENST00000512657.5:-107 NM_001135146:-107 NM_001135147:122 ENST00000424970.6:170 AK304274:170 NM_022154:184 ENST00000394833.6:236 AB040120:236 |
TATA-Box annotation
| Distance to TSS: | 27824 |
|---|---|
| Nearest PromoterID: | NR_136185 |
| Entrez ID: | 105374297 |
| Nearest Unigene: | Hs.655175 |
| Nearest Refseq: | NR_136185 |
| Nearest Ensembl: | |
| Gene Name: | solute carrier family 39 member 8 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC105374297 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
