Difference between revisions of "TSS:Hg 242192.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=NM_001163149:-145 ENST00000403685.5:-154 X87175:-154 ENST00000431887.5:-289 ENST00000242066.9:-330 ENST00000421381.5:-330 NM_001163148:-330 NM_001370555:389 NR_120445:393 ENST00000443137.5:405 BC045776:405 AK294755:458 | |all_trans=NM_001163149:-145 ENST00000403685.5:-154 X87175:-154 ENST00000431887.5:-289 ENST00000242066.9:-330 ENST00000421381.5:-330 NM_001163148:-330 NM_001370555:389 NR_120445:393 ENST00000443137.5:405 BC045776:405 AK294755:458 | ||
| − | |chr= | + | |chr=chr7 |
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=-145 | |distance=-145 | ||
|distance_to_tss=-275 | |distance_to_tss=-275 | ||
| − | |end= | + | |end=13991095 |
|end_of_center_position=13991095 | |end_of_center_position=13991095 | ||
|entrez_id=102465668 | |entrez_id=102465668 | ||
| Line 24: | Line 24: | ||
|num_trans=12 | |num_trans=12 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=13991094 |
|start_of_center_position=13991094 | |start_of_center_position=13991094 | ||
|strand=- | |strand=- | ||
|transcript_name=NM_001163149 | |transcript_name=NM_001163149 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_242192.1 | |tss_id=hg_242192.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=P50549 | |uniprot_id=P50549 | ||
}} | }} | ||
Revision as of 12:22, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 13991094 |
|---|---|
| End of the center position in the TSS region: | 13991095 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001163149 |
|---|---|
| Distance: | -145 |
| Num_trans: | 12 |
| All_trans: | NM_001163149:-145 ENST00000403685.5:-154 X87175:-154 ENST00000431887.5:-289 ENST00000242066.9:-330 ENST00000421381.5:-330 NM_001163148:-330 NM_001370555:389 NR_120445:393 ENST00000443137.5:405 BC045776:405 AK294755:458 |
TATA-Box annotation
| Distance to TSS: | -275 |
|---|---|
| Nearest PromoterID: | NR_106961 |
| Entrez ID: | 102465668 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_106961 |
| Nearest Ensembl: | ENSG00000276712 |
| Gene Name: | ETS variant transcription factor 1 |
| Gene Alias: | hsa-mir-7111 |
| Gene Description: | microRNA 7111 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
