Difference between revisions of "TSS:Hg 242857.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans=KJ896913:-64 BC069117:-64 BC107101:-64 | |all_trans=KJ896913:-64 BC069117:-64 BC107101:-64 | ||
| − | |chr= | + | |chr=chr8 |
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-64 | |distance=-64 | ||
|distance_to_tss=33813 | |distance_to_tss=33813 | ||
| − | |end= | + | |end=52939972 |
|end_of_center_position=52939972 | |end_of_center_position=52939972 | ||
|entrez_id=1278 | |entrez_id=1278 | ||
| Line 24: | Line 24: | ||
|num_trans=3 | |num_trans=3 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=52939971 |
|start_of_center_position=52939971 | |start_of_center_position=52939971 | ||
| − | |strand= | + | |strand=+ |
|transcript_name=KJ896913 BC069117 BC107101 | |transcript_name=KJ896913 BC069117 BC107101 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_242857.1 | |tss_id=hg_242857.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 12:37, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 52939971 |
|---|---|
| End of the center position in the TSS region: | 52939972 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | KJ896913 BC069117 BC107101 |
|---|---|
| Distance: | -64 |
| Num_trans: | 3 |
| All_trans: | KJ896913:-64 BC069117:-64 BC107101:-64 |
TATA-Box annotation
| Distance to TSS: | 33813 |
|---|---|
| Nearest PromoterID: | NM_000089 |
| Entrez ID: | 1278 |
| Nearest Unigene: | Hs.489142 |
| Nearest Refseq: | NM_000089 |
| Nearest Ensembl: | ENSG00000164692 |
| Gene Name: | neuropeptides B and W receptor 1 |
| Gene Alias: | EDSARTH2|EDSCV|OI4 |
| Gene Description: | collagen type I alpha 2 chain |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
