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Difference between revisions of "TSS:Hg 243192.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|all_trans=AK127340:-133
 
|all_trans=AK127340:-133
|chr=chr8
+
|chr=chr9
 
|cpg_percent=0.135
 
|cpg_percent=0.135
 
|distance=-133
 
|distance=-133
 
|distance_to_tss=64
 
|distance_to_tss=64
|end=52939972
+
|end=137487495
 
|end_of_center_position=137487495
 
|end_of_center_position=137487495
 
|entrez_id=2831
 
|entrez_id=2831
Line 24: Line 24:
 
|num_trans=1
 
|num_trans=1
 
|species=human
 
|species=human
|start=52939971
+
|start=137487494
 
|start_of_center_position=137487494
 
|start_of_center_position=137487494
|strand=+
+
|strand=-
 
|transcript_name=AK127340
 
|transcript_name=AK127340
 
|tss_classification=yes
 
|tss_classification=yes

Revision as of 12:45, 14 July 2021

Basic information about the TSS


TSS ID:hg_243192.1
Species:human
Chr:chr9
TSS Classification:yes
Start:137487494
End:137487495
Strand:-
TSS Score:1
Start of the center position in the TSS region:137487494
End of the center position in the TSS region:137487495



Gene and protein annotation


Transcript_name:AK127340
Distance:-133
GeneID:375775
HGNC/MGI_ID:HGNC:24768
UniProt_ID:B3KXH5
Gene_name:patatin like phospholipase domain containing 7
Gene_symbol:PNPLA7
Gene_synonyms:FLJ31318 FLJ43070 FLJ44279 NTE-R1 NTEL1 RP11-48C7.2
Gene_source:HGNC:24768



Transcript annotation


Transcript_name:AK127340
Distance:-133
Num_trans:1
All_trans:AK127340:-133



TATA-Box annotation


Distance to TSS:64
Nearest PromoterID:NM_005285
Entrez ID:2831
Nearest Unigene:Hs.248117
Nearest Refseq:NM_005285
Nearest Ensembl:ENSG00000183729
Gene Name:patatin like phospholipase domain containing 7
Gene Alias:GPR7
Gene Description:neuropeptides B and W receptor 1
Gene Type:protein-coding
CpG%:0.135
GC%:0.716418
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):