Difference between revisions of "TSS:Hg 243236.1"
From referenceTSS
| Line 2: | Line 2: | ||
|JBTS21= | |JBTS21= | ||
|all_trans=AB006190:8 ENST00000537089.5:13 BC119672:13 BC119673:13 ENST00000377425.8:19 BC062701:19 ENST00000623097.3:-27 ENST00000624890.3:31 AK297885:31 ENST00000297988.6:-41 NM_001170:-41 NM_001376193:-41 NM_001376192:-41 NM_001376191:-41 NR_164778:-41 NR_164779:-41 ENST00000624075.3:-59 AK297860:-59 ENST00000624420.3:61 AK294028:61 ENST00000625032.1:-118 AK301949:-118 ENST00000623519.1:-125 ENST00000625109.3:-153 ENST00000624005.3:-155 NR_134513:-155 NM_001318156:-155 NM_001318158:-155 NM_001318157:-155 NR_134515:-155 NR_134514:-155 | |all_trans=AB006190:8 ENST00000537089.5:13 BC119672:13 BC119673:13 ENST00000377425.8:19 BC062701:19 ENST00000623097.3:-27 ENST00000624890.3:31 AK297885:31 ENST00000297988.6:-41 NM_001170:-41 NM_001376193:-41 NM_001376192:-41 NM_001376191:-41 NR_164778:-41 NR_164779:-41 ENST00000624075.3:-59 AK297860:-59 ENST00000624420.3:61 AK294028:61 ENST00000625032.1:-118 AK301949:-118 ENST00000623519.1:-125 ENST00000625109.3:-153 ENST00000624005.3:-155 NR_134513:-155 NM_001318156:-155 NM_001318158:-155 NM_001318157:-155 NR_134515:-155 NR_134514:-155 | ||
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=8 | |distance=8 | ||
|distance_to_tss=-121 | |distance_to_tss=-121 | ||
| − | |end= | + | |end=33402527 |
|end_of_center_position=33402527 | |end_of_center_position=33402527 | ||
|entrez_id=79848 | |entrez_id=79848 | ||
| Line 25: | Line 25: | ||
|num_trans=31 | |num_trans=31 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=33402526 |
|start_of_center_position=33402526 | |start_of_center_position=33402526 | ||
| − | |strand= | + | |strand=- |
|transcript_name=AB006190 | |transcript_name=AB006190 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_243236.1 | |tss_id=hg_243236.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 12:46, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 33402526 |
|---|---|
| End of the center position in the TSS region: | 33402527 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB006190 |
|---|---|
| Distance: | 8 |
| Num_trans: | 31 |
| All_trans: | AB006190:8 ENST00000537089.5:13 BC119672:13 BC119673:13 ENST00000377425.8:19 BC062701:19 ENST00000623097.3:-27 ENST00000624890.3:31 AK297885:31 ENST00000297988.6:-41 NM_001170:-41 NM_001376193:-41 NM_001376192:-41 NM_001376191:-41 NR_164778:-41 NR_164779:-41 ENST00000624075.3:-59 AK297860:-59 ENST00000624420.3:61 AK294028:61 ENST00000625032.1:-118 AK301949:-118 ENST00000623519.1:-125 ENST00000625109.3:-153 ENST00000624005.3:-155 NR_134513:-155 NM_001318156:-155 NM_001318158:-155 NM_001318157:-155 NR_134515:-155 NR_134514:-155 |
TATA-Box annotation
| Distance to TSS: | -121 |
|---|---|
| Nearest PromoterID: | NM_001291339 |
| Entrez ID: | 79848 |
| Nearest Unigene: | Hs.370147 |
| Nearest Refseq: | NM_024790 |
| Nearest Ensembl: | ENSG00000104218 |
| Gene Name: | aquaporin 7 |
| Gene Alias: | CSPP|JBTS21 |
| Gene Description: | centrosome and spindle pole associated protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
