Difference between revisions of "TSS:Hg 243513.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=AK026170:-87 BC009316:141 DQ593671:-146 BC018865:-300 AB462505:319 Y17174:-403 BC006998:-429 AF054990:-487 AK126611:-498 | |all_trans=AK026170:-87 BC009316:141 DQ593671:-146 BC018865:-300 AB462505:319 Y17174:-403 BC006998:-429 AF054990:-487 AK126611:-498 | ||
| − | |chr= | + | |chr=chrM |
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=-87 | |distance=-87 | ||
|distance_to_tss=24603 | |distance_to_tss=24603 | ||
| − | |end= | + | |end=2393 |
|end_of_center_position=2393 | |end_of_center_position=2393 | ||
|entrez_id=157922 | |entrez_id=157922 | ||
| Line 24: | Line 24: | ||
|num_trans=9 | |num_trans=9 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=2392 |
|start_of_center_position=2392 | |start_of_center_position=2392 | ||
| − | |strand= | + | |strand=+ |
|transcript_name=AK026170 | |transcript_name=AK026170 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_243513.1 | |tss_id=hg_243513.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q5T5Y3 | |uniprot_id=Q5T5Y3 | ||
}} | }} | ||
Latest revision as of 12:52, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 2392 |
|---|---|
| End of the center position in the TSS region: | 2393 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK026170 |
|---|---|
| Distance: | -87 |
| Num_trans: | 9 |
| All_trans: | AK026170:-87 BC009316:141 DQ593671:-146 BC018865:-300 AB462505:319 Y17174:-403 BC006998:-429 AF054990:-487 AK126611:-498 |
TATA-Box annotation
| Distance to TSS: | 24603 |
|---|---|
| Nearest PromoterID: | NM_015447 |
| Entrez ID: | 157922 |
| Nearest Unigene: | Hs.522493 |
| Nearest Refseq: | NM_015447 |
| Nearest Ensembl: | ENSG00000130559 |
| Gene Name: | CAMSAP1 |
| Gene Alias: | - |
| Gene Description: | calmodulin regulated spectrin associated protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
