Difference between revisions of "TSS:Hg 243536.1"
From referenceTSS
| Line 3: | Line 3: | ||
|NTEL1= | |NTEL1= | ||
|all_trans=DQ596276:63 AB462505:-227 DQ598641:291 AB026838:291 LX251243:291 LZ235584:291 S55822:291 ENST00000361390.2:368 LP790444:368 AK074482:368 LP790447:368 LP790441:368 BC017294:382 BC061915:383 BC009316:-405 AF216862:409 | |all_trans=DQ596276:63 AB462505:-227 DQ598641:291 AB026838:291 LX251243:291 LZ235584:291 S55822:291 ENST00000361390.2:368 LP790444:368 AK074482:368 LP790447:368 LP790441:368 BC017294:382 BC061915:383 BC009316:-405 AF216862:409 | ||
| − | |chr= | + | |chr=chrM |
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=63 | |distance=63 | ||
|distance_to_tss=27694 | |distance_to_tss=27694 | ||
| − | |end= | + | |end=2939 |
|end_of_center_position=2939 | |end_of_center_position=2939 | ||
|entrez_id=375775 | |entrez_id=375775 | ||
| Line 26: | Line 26: | ||
|num_trans=16 | |num_trans=16 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=2938 |
|start_of_center_position=2938 | |start_of_center_position=2938 | ||
| − | |strand= | + | |strand=+ |
|transcript_name=DQ596276 | |transcript_name=DQ596276 | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 12:52, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 2938 |
|---|---|
| End of the center position in the TSS region: | 2939 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | DQ596276 |
|---|---|
| Distance: | 63 |
| Num_trans: | 16 |
| All_trans: | DQ596276:63 AB462505:-227 DQ598641:291 AB026838:291 LX251243:291 LZ235584:291 S55822:291 ENST00000361390.2:368 LP790444:368 AK074482:368 LP790447:368 LP790441:368 BC017294:382 BC061915:383 BC009316:-405 AF216862:409 |
TATA-Box annotation
| Distance to TSS: | 27694 |
|---|---|
| Nearest PromoterID: | NM_152286 |
| Entrez ID: | 375775 |
| Nearest Unigene: | Hs.294147 |
| Nearest Refseq: | NM_152286 |
| Nearest Ensembl: | ENSG00000130653 |
| Gene Name: | PNPLA7 |
| Gene Alias: | C9orf111|NTE-R1|NTEL1 |
| Gene Description: | patatin like phospholipase domain containing 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
