Difference between revisions of "TSS:Mm 100005.1"
From referenceTSS
| Line 30: | Line 30: | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000053361.11 ENSMUST00000021071.13 AK128950 | |transcript_name=ENSMUST00000053361.11 ENSMUST00000021071.13 AK128950 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_100005.1 | |tss_id=mm_100005.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=I7HPW4 J3JS84 | |uniprot_id=I7HPW4 J3JS84 | ||
}} | }} | ||
Revision as of 09:51, 16 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 114851841 |
|---|---|
| End of the center position in the TSS region: | 114851842 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000053361.11 ENSMUST00000021071.13 AK128950 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENSMUST00000053361.11:0 ENSMUST00000021071.13:0 AK128950:0 ENSMUST00000136785.1:12 NM_147217:162 BC031439:187 AY079516:-274 ENSMUST00000177952.7:-275 NM_001110338:-275 NM_001110337:-283 AK014308:363 ENSMUST00000142262.1:451 |
TATA-Box annotation
| Distance to TSS: | -189 |
|---|---|
| Nearest PromoterID: | NM_147217 |
| Entrez ID: | 70355 |
| Nearest Unigene: | Mm.242413 |
| Nearest Refseq: | NM_147217 |
| Nearest Ensembl: | ENSMUSG00000051043 |
| Gene Name: | G protein-coupled receptor, family C, group 5, member C |
| Gene Alias: | 1110028I06Rik|3200002M13Rik|Raig3 |
| Gene Description: | G protein-coupled receptor, family C, group 5, member C |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
