Difference between revisions of "TSS:Hg 100056.1"
From referenceTSS
| Line 6: | Line 6: | ||
|TILRR= | |TILRR= | ||
|TRIGNO2= | |TRIGNO2= | ||
| − | |all_trans= | + | |all_trans=HGNC:23399 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 28: | Line 28: | ||
|nearest_refseq=NM_144966 | |nearest_refseq=NM_144966 | ||
|nearest_unigene=Hs.50850 | |nearest_unigene=Hs.50850 | ||
| − | |num_trans= | + | |num_trans=158326 |
|species=human | |species=human | ||
|start=14910924 | |start=14910924 | ||
| Line 34: | Line 34: | ||
|strand=- | |strand=- | ||
|tata_box=11(TCCCTTAAATGC,-,0.00),13(CCTTAAATGCCA,+,0.00) | |tata_box=11(TCCCTTAAATGC,-,0.00),13(CCTTAAATGCCA,+,0.00) | ||
| − | |transcript_name=ENST00000380875.7 | + | |transcript_name=ENST00000380875.7 BX537574 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100056.1 | |tss_id=hg_100056.1 | ||
Latest revision as of 17:35, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 14910927 |
|---|---|
| End of the center position in the TSS region: | 14910928 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000380875.7 BX537574 |
|---|---|
| Distance: | -65 |
| Num_trans: | 158326 |
| All_trans: | HGNC:23399 |
TATA-Box annotation
| Distance to TSS: | 68 |
|---|---|
| Nearest PromoterID: | NM_144966 |
| Entrez ID: | 158326 |
| Nearest Unigene: | Hs.50850 |
| Nearest Refseq: | NM_144966 |
| Nearest Ensembl: | ENSG00000164946 |
| Gene Name: | FRAS1 related extracellular matrix 1 |
| Gene Alias: | BNAR|C9orf143|C9orf145|C9orf154|MOTA|TILRR|TRIGNO2 |
| Gene Description: | FRAS1 related extracellular matrix 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 11(TCCCTTAAATGC,-,0.00),13(CCTTAAATGCCA,+,0.00) |
