Personal tools

Difference between revisions of "TSS:Hg 100315.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|CAAP=
 
|CAAP=
|all_trans=ENST00000625311.1:0 AK300739:0 AK301673:29 ENST00000495958.5:-149 HQ447530:-261 AB590748:-261 CU687198:-261 BC071953:-272 ENST00000483493.6:-332 ENST00000650615.1:-337 ENST00000333916.8:-347 NM_024828:-347 AK023719:-347 ENST00000520187.1:-348 BC014658:-349 NM_001167575:-373
+
|all_trans=HGNC:25834
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 23: Line 23:
 
|nearest_refseq=NM_024828
 
|nearest_refseq=NM_024828
 
|nearest_unigene=Hs.178357
 
|nearest_unigene=Hs.178357
|num_trans=16
+
|num_trans=79886
 
|species=human
 
|species=human
 
|start=26892400
 
|start=26892400

Latest revision as of 17:40, 19 July 2021

Basic information about the TSS


TSS ID:hg_100315.1
Species:human
Chr:chr9
TSS Classification:yes
Start:26892400
End:26892455
Strand:-
TSS Score:1
Start of the center position in the TSS region:26892427
End of the center position in the TSS region:26892428



Gene and protein annotation


Transcript_name:ENST00000625311.1 AK300739
Distance:0
GeneID:79886
HGNC/MGI_ID:HGNC:25834
UniProt_ID:B4DUP7 Q9H8G2
Gene_name:caspase activity and apoptosis inhibitor 1
Gene_symbol:CAAP1
Gene_synonyms:CAAP FLJ13657
Gene_source:HGNC:25834



Transcript annotation


Transcript_name:ENST00000625311.1 AK300739
Distance:0
Num_trans:79886
All_trans:HGNC:25834



TATA-Box annotation


Distance to TSS:374
Nearest PromoterID:NM_024828
Entrez ID:79886
Nearest Unigene:Hs.178357
Nearest Refseq:NM_024828
Nearest Ensembl:ENSG00000120159
Gene Name:caspase activity and apoptosis inhibitor 1
Gene Alias:C9orf82|CAAP
Gene Description:caspase activity and apoptosis inhibitor 1
Gene Type:protein-coding
CpG%:0.105
GC%:0.696517
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):