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Difference between revisions of "TSS:Hg 100416.1"

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{{TSSDetail
 
{{TSSDetail
 
|SMU-1=
 
|SMU-1=
|all_trans=BC002876:0 EF011613:0 AK001667:0 AK225587:-13 AK304767:-15 AK225559:-19 KJ894162:20 ENST00000397149.4:-22 NM_018225:-22 DQ893005:22 DQ896251:22 CU678268:22 LP895622:-68
+
|all_trans=HGNC:18247
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 24: Line 24:
 
|nearest_refseq=NM_018225
 
|nearest_refseq=NM_018225
 
|nearest_unigene=Hs.655351
 
|nearest_unigene=Hs.655351
|num_trans=13
+
|num_trans=55234
 
|species=human
 
|species=human
 
|start=33076629
 
|start=33076629

Latest revision as of 17:42, 19 July 2021

Basic information about the TSS


TSS ID:hg_100416.1
Species:human
Chr:chr9
TSS Classification:yes
Start:33076629
End:33076652
Strand:-
TSS Score:1
Start of the center position in the TSS region:33076640
End of the center position in the TSS region:33076641



Gene and protein annotation


Transcript_name:BC002876 EF011613 AK001667
Distance:0
GeneID:55234
HGNC/MGI_ID:HGNC:18247
UniProt_ID:
Gene_name:SMU1 DNA replication regulator and spliceosomal factor
Gene_symbol:SMU1
Gene_synonyms:BWD FLJ10805 SMU-1 fSAP57
Gene_source:HGNC:18247



Transcript annotation


Transcript_name:BC002876 EF011613 AK001667
Distance:0
Num_trans:55234
All_trans:HGNC:18247



TATA-Box annotation


Distance to TSS:33
Nearest PromoterID:NM_018225
Entrez ID:55234
Nearest Unigene:Hs.655351
Nearest Refseq:NM_018225
Nearest Ensembl:ENSG00000122692
Gene Name:SMU1 DNA replication regulator and spliceosomal factor
Gene Alias:BWD|SMU-1|fSAP57
Gene Description:SMU1 DNA replication regulator and spliceosomal factor
Gene Type:protein-coding
CpG%:0.1
GC%:0.631841
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):