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Difference between revisions of "TSS:Hg 100445.1"

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Line 4: Line 4:
 
|GT1=
 
|GT1=
 
|GTB=
 
|GTB=
|all_trans=ENST00000535206.5:33 BC045773:33 ENST00000379731.5:53 NM_001378497:53 NM_001497:53 NM_001378496:53 M22921:153 U10474:153 D29805:156 X13223:156 X14085:156 HG765099:186 HG765101:186 AK312797:192 AK296928:203 KJ901453:220 X55415:220 AB590749:220 NM_001378495:230 AK316294:241
+
|all_trans=HGNC:924
 
|beta4Gal-T1=
 
|beta4Gal-T1=
 
|chr=chr9
 
|chr=chr9
Line 27: Line 27:
 
|nearest_refseq=NM_001497
 
|nearest_refseq=NM_001497
 
|nearest_unigene=Hs.272011
 
|nearest_unigene=Hs.272011
|num_trans=20
+
|num_trans=2683
 
|species=human
 
|species=human
 
|start=33167388
 
|start=33167388

Latest revision as of 17:43, 19 July 2021

Basic information about the TSS


TSS ID:hg_100445.1
Species:human
Chr:chr9
TSS Classification:yes
Start:33167388
End:33167399
Strand:-
TSS Score:1
Start of the center position in the TSS region:33167393
End of the center position in the TSS region:33167394



Gene and protein annotation


Transcript_name:ENST00000535206.5 BC045773
Distance:33
GeneID:2683
HGNC/MGI_ID:HGNC:924
UniProt_ID:Q86XA6
Gene_name:beta-1,4-galactosyltransferase 1
Gene_symbol:B4GALT1
Gene_synonyms:beta4Gal-T1
Gene_source:HGNC:924



Transcript annotation


Transcript_name:ENST00000535206.5 BC045773
Distance:33
Num_trans:2683
All_trans:HGNC:924



TATA-Box annotation


Distance to TSS:-36
Nearest PromoterID:NM_001497
Entrez ID:2683
Nearest Unigene:Hs.272011
Nearest Refseq:NM_001497
Nearest Ensembl:ENSG00000086062
Gene Name:beta-1,4-galactosyltransferase 1
Gene Alias:B4GAL-T1|CDG2D|GGTB2|GT1|GTB|beta4Gal-T1
Gene Description:beta-1,4-galactosyltransferase 1
Gene Type:protein-coding
CpG%:0.125
GC%:0.79602
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):