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Difference between revisions of "TSS:Hg 10069.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000442889.1:-437
+
|all_trans=HGNC:53020
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.12
 
|cpg_percent=0.12
Line 22: Line 22:
 
|nearest_refseq=NR_149049
 
|nearest_refseq=NR_149049
 
|nearest_unigene=
 
|nearest_unigene=
|num_trans=1
+
|num_trans=
 
|species=human
 
|species=human
 
|start=6784400
 
|start=6784400

Latest revision as of 17:49, 19 July 2021

Basic information about the TSS


TSS ID:hg_10069.1
Species:human
Chr:chr1
TSS Classification:yes
Start:6784400
End:6784406
Strand:-
TSS Score:1
Start of the center position in the TSS region:6784403
End of the center position in the TSS region:6784404



Gene and protein annotation


Transcript_name:ENST00000442889.1
Distance:-437
GeneID:
HGNC/MGI_ID:HGNC:53020
UniProt_ID:
Gene_name:CAMTA1 divergent transcript
Gene_symbol:CAMTA1-DT
Gene_synonyms:lncCAMTA1
Gene_source:HGNC:53020



Transcript annotation


Transcript_name:ENST00000442889.1
Distance:-437
Num_trans:
All_trans:HGNC:53020



TATA-Box annotation


Distance to TSS:577
Nearest PromoterID:NR_149049
Entrez ID:110841581
Nearest Unigene:
Nearest Refseq:NR_149049
Nearest Ensembl:
Gene Name:CAMTA1 divergent transcript
Gene Alias:lncCAMTA1
Gene Description:CAMTA1 divergent transcript
Gene Type:ncRNA
CpG%:0.12
GC%:0.721393
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):