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Difference between revisions of "TSS:Hg 101024.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK000972:0 AK225349:0 BC039588:8 ENST00000376854.6:-11 NM_017998:-11 KJ894122:216
+
|all_trans=HGNC:23433
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.155
 
|cpg_percent=0.155
Line 22: Line 22:
 
|nearest_refseq=NM_017998
 
|nearest_refseq=NM_017998
 
|nearest_unigene=Hs.532296
 
|nearest_unigene=Hs.532296
|num_trans=6
+
|num_trans=55071
 
|species=human
 
|species=human
 
|start=74952827
 
|start=74952827

Latest revision as of 17:56, 19 July 2021

Basic information about the TSS


TSS ID:hg_101024.1
Species:human
Chr:chr9
TSS Classification:yes
Start:74952827
End:74952901
Strand:-
TSS Score:1
Start of the center position in the TSS region:74952864
End of the center position in the TSS region:74952865



Gene and protein annotation


Transcript_name:AK000972 AK225349
Distance:0
GeneID:55071
HGNC/MGI_ID:HGNC:23433
UniProt_ID:
Gene_name:chromosome 9 open reading frame 40
Gene_symbol:C9orf40
Gene_synonyms:FLJ10110
Gene_source:HGNC:23433



Transcript annotation


Transcript_name:AK000972 AK225349
Distance:0
Num_trans:55071
All_trans:HGNC:23433



TATA-Box annotation


Distance to TSS:48
Nearest PromoterID:NM_017998
Entrez ID:55071
Nearest Unigene:Hs.532296
Nearest Refseq:NM_017998
Nearest Ensembl:ENSG00000135045
Gene Name:chromosome 9 open reading frame 40
Gene Alias:-
Gene Description:chromosome 9 open reading frame 40
Gene Type:protein-coding
CpG%:0.155
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):