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Difference between revisions of "TSS:Hg 10115.1"

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Line 4: Line 4:
 
|DNB1=
 
|DNB1=
 
|NEDBEH=
 
|NEDBEH=
|all_trans=ENST00000476556.5:-23 ENST00000492766.5:-23 AF016005:-23 NM_001042682:-189 ENST00000460659.5:214
+
|all_trans=HGNC:9965
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.135
 
|cpg_percent=0.135
Line 26: Line 26:
 
|nearest_refseq=NM_012102
 
|nearest_refseq=NM_012102
 
|nearest_unigene=Hs.463041
 
|nearest_unigene=Hs.463041
|num_trans=5
+
|num_trans=473
 
|species=human
 
|species=human
 
|start=8423632
 
|start=8423632

Latest revision as of 17:58, 19 July 2021

Basic information about the TSS


TSS ID:hg_10115.1
Species:human
Chr:chr1
TSS Classification:yes
Start:8423632
End:8423643
Strand:-
TSS Score:1
Start of the center position in the TSS region:8423637
End of the center position in the TSS region:8423638



Gene and protein annotation


Transcript_name:ENST00000476556.5 ENST00000492766.5 AF016005
Distance:-23
GeneID:473
HGNC/MGI_ID:HGNC:9965
UniProt_ID:Q9P2R6
Gene_name:arginine-glutamic acid dipeptide repeats
Gene_symbol:RERE
Gene_synonyms:ARG ARP ATN2 DNB1 KIAA0458
Gene_source:HGNC:9965



Transcript annotation


Transcript_name:ENST00000476556.5 ENST00000492766.5 AF016005
Distance:-23
Num_trans:473
All_trans:HGNC:9965



TATA-Box annotation


Distance to TSS:194
Nearest PromoterID:NM_001042682
Entrez ID:473
Nearest Unigene:Hs.463041
Nearest Refseq:NM_012102
Nearest Ensembl:ENSG00000142599
Gene Name:arginine-glutamic acid dipeptide repeats
Gene Alias:ARG|ARP|ATN1L|DNB1|NEDBEH
Gene Description:arginine-glutamic acid dipeptide repeats
Gene Type:protein-coding
CpG%:0.135
GC%:0.79602
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):