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Difference between revisions of "TSS:Hg 101152.1"

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Line 4: Line 4:
 
|UBQN=
 
|UBQN=
 
|XDRP1=
 
|XDRP1=
|all_trans=AK074535:-97 ENST00000376395.9:136 NM_013438:136 NM_053067:136 AL136643:137 AK027556:142 LF384925:-147 MA620502:-147 BC039294:150 BC017289:150 AK027576:151 ENST00000257468.11:160 BC010066:161 AB035275:306 HM005532:381 AB528730:412 AF176069:415 AF293384:415 LF331823:453 MA567400:453 ENST00000529923.1:493
+
|all_trans=HGNC:12508
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.08
 
|cpg_percent=0.08
Line 26: Line 26:
 
|nearest_refseq=NM_013438
 
|nearest_refseq=NM_013438
 
|nearest_unigene=Hs.9589
 
|nearest_unigene=Hs.9589
|num_trans=21
+
|num_trans=29979
 
|species=human
 
|species=human
 
|start=83708093
 
|start=83708093

Latest revision as of 17:58, 19 July 2021

Basic information about the TSS


TSS ID:hg_101152.1
Species:human
Chr:chr9
TSS Classification:yes
Start:83708093
End:83708106
Strand:-
TSS Score:1
Start of the center position in the TSS region:83708099
End of the center position in the TSS region:83708100



Gene and protein annotation


Transcript_name:AK074535
Distance:-97
GeneID:29979
HGNC/MGI_ID:HGNC:12508
UniProt_ID:
Gene_name:ubiquilin 1
Gene_symbol:UBQLN1
Gene_synonyms:DA41 DSK2 PLIC-1 XDRP1
Gene_source:HGNC:12508



Transcript annotation


Transcript_name:AK074535
Distance:-97
Num_trans:29979
All_trans:HGNC:12508



TATA-Box annotation


Distance to TSS:-142
Nearest PromoterID:NM_053067
Entrez ID:29979
Nearest Unigene:Hs.9589
Nearest Refseq:NM_013438
Nearest Ensembl:ENSG00000135018
Gene Name:ubiquilin 1
Gene Alias:DA41|DSK2|PLIC-1|UBQN|XDRP1
Gene Description:ubiquilin 1
Gene Type:protein-coding
CpG%:0.08
GC%:0.567164
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):