Difference between revisions of "TSS:Hg 101227.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:4165 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_002048 | |nearest_refseq=NM_002048 | ||
|nearest_unigene=Hs.65029 | |nearest_unigene=Hs.65029 | ||
| − | |num_trans= | + | |num_trans=2619 |
|species=human | |species=human | ||
|start=86947496 | |start=86947496 | ||
| Line 28: | Line 28: | ||
|strand=- | |strand=- | ||
|tata_box=-30(GTATTTAAAGCC,+,0.00) | |tata_box=-30(GTATTTAAAGCC,+,0.00) | ||
| − | |transcript_name=ENST00000298743.9 | + | |transcript_name=ENST00000298743.9 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101227.1 | |tss_id=hg_101227.1 | ||
Latest revision as of 18:00, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 86947507 |
|---|---|
| End of the center position in the TSS region: | 86947508 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000298743.9 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2619 |
| All_trans: | HGNC:4165 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_002048 |
| Entrez ID: | 2619 |
| Nearest Unigene: | Hs.65029 |
| Nearest Refseq: | NM_002048 |
| Nearest Ensembl: | ENSG00000180447 |
| Gene Name: | growth arrest specific 1 |
| Gene Alias: | - |
| Gene Description: | growth arrest specific 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -30(GTATTTAAAGCC,+,0.00) |
