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Difference between revisions of "TSS:Hg 101496.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000650398.1:0 ENST00000479094.5:0 ENST00000523407.1:0 ENST00000520403.1:0 BC037551:0 BC063650:0 BC038803:0 BC080634:6 ENST00000423591.5:-24 ENST00000476484.5:-24 BC046183:-26 ENST00000649557.1:-50 NR_136238:-70 NR_136237:-70 NR_136236:-70 NR_136235:-70 NR_136234:-70 NR_136233:-70 NR_136232:-70 NM_001322224:-70 DQ580956:176 ENST00000483056.5:272 ENST00000428152.1:366 ENST00000428378.1:497
+
|all_trans=HGNC:23389
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.145
 
|cpg_percent=0.145
Line 22: Line 22:
 
|nearest_refseq=NM_198841
 
|nearest_refseq=NM_198841
 
|nearest_unigene=Hs.350364
 
|nearest_unigene=Hs.350364
|num_trans=24
+
|num_trans=158293
 
|species=human
 
|species=human
 
|start=93451479
 
|start=93451479

Latest revision as of 18:06, 19 July 2021

Basic information about the TSS


TSS ID:hg_101496.1
Species:human
Chr:chr9
TSS Classification:yes
Start:93451479
End:93451538
Strand:-
TSS Score:1
Start of the center position in the TSS region:93451508
End of the center position in the TSS region:93451509



Gene and protein annotation


Transcript_name:ENST00000650398.1 ENST00000479094.5 ENST00000523407.1 ENST00000520403.1 BC037551 BC063650 BC038803
Distance:0
GeneID:158293
HGNC/MGI_ID:HGNC:23389
UniProt_ID:
Gene_name:family with sequence similarity 120A opposite strand
Gene_symbol:FAM120AOS
Gene_synonyms:
Gene_source:HGNC:23389



Transcript annotation


Transcript_name:ENST00000650398.1 ENST00000479094.5 ENST00000523407.1 ENST00000520403.1 BC037551 BC063650 BC038803
Distance:0
Num_trans:158293
All_trans:HGNC:23389



TATA-Box annotation


Distance to TSS:99
Nearest PromoterID:NR_136237
Entrez ID:158293
Nearest Unigene:Hs.350364
Nearest Refseq:NM_198841
Nearest Ensembl:ENSG00000188938
Gene Name:family with sequence similarity 120A opposite strand
Gene Alias:C9orf10OS
Gene Description:family with sequence similarity 120A opposite strand
Gene Type:protein-coding
CpG%:0.145
GC%:0.80597
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):