Difference between revisions of "TSS:Hg 101901.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|PTPH1= | |PTPH1= | ||
| − | |all_trans= | + | |all_trans=HGNC:9655 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_002829 | |nearest_refseq=NM_002829 | ||
|nearest_unigene=Hs.436429 | |nearest_unigene=Hs.436429 | ||
| − | |num_trans= | + | |num_trans=5774 |
|species=human | |species=human | ||
|start=109428964 | |start=109428964 | ||
| Line 29: | Line 29: | ||
|strand=- | |strand=- | ||
|tata_box=48(TTATTTAAAAGC,-,0.00) | |tata_box=48(TTATTTAAAAGC,-,0.00) | ||
| − | |transcript_name= | + | |transcript_name=AK316118 AK296388 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101901.1 | |tss_id=hg_101901.1 | ||
Latest revision as of 18:15, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109428970 |
|---|---|
| End of the center position in the TSS region: | 109428971 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK316118 AK296388 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5774 |
| All_trans: | HGNC:9655 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_001145371 |
| Entrez ID: | 5774 |
| Nearest Unigene: | Hs.436429 |
| Nearest Refseq: | NM_002829 |
| Nearest Ensembl: | ENSG00000070159 |
| Gene Name: | protein tyrosine phosphatase non-receptor type 3 |
| Gene Alias: | PTP-H1|PTPH1 |
| Gene Description: | protein tyrosine phosphatase non-receptor type 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 48(TTATTTAAAAGC,-,0.00) |
