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Difference between revisions of "TSS:Hg 101938.1"

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Line 4: Line 4:
 
|SEL-OB=
 
|SEL-OB=
 
|SELOB=
 
|SELOB=
|all_trans=ENST00000401783.6:26 ENST00000374461.1:26 BC030816:26 AK122605:30 ENST00000374469.6:165 NM_153366:165 AJ619977:200 AY243503:200
+
|all_trans=HGNC:15985
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.03
 
|cpg_percent=0.03
Line 26: Line 26:
 
|nearest_refseq=NM_153366
 
|nearest_refseq=NM_153366
 
|nearest_unigene=Hs.522334
 
|nearest_unigene=Hs.522334
|num_trans=8
+
|num_trans=79987
 
|species=human
 
|species=human
 
|start=110579905
 
|start=110579905

Latest revision as of 18:16, 19 July 2021

Basic information about the TSS


TSS ID:hg_101938.1
Species:human
Chr:chr9
TSS Classification:yes
Start:110579905
End:110579934
Strand:-
TSS Score:1
Start of the center position in the TSS region:110579919
End of the center position in the TSS region:110579920



Gene and protein annotation


Transcript_name:ENST00000401783.6 ENST00000374461.1 BC030816
Distance:26
GeneID:79987
HGNC/MGI_ID:HGNC:15985
UniProt_ID:A0A0A0MSD0 Q4LDE5
Gene_name:sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
Gene_symbol:SVEP1
Gene_synonyms:FLJ13529 POLYDOM bA427L11.3
Gene_source:HGNC:15985



Transcript annotation


Transcript_name:ENST00000401783.6 ENST00000374461.1 BC030816
Distance:26
Num_trans:79987
All_trans:HGNC:15985



TATA-Box annotation


Distance to TSS:-179
Nearest PromoterID:NM_153366
Entrez ID:79987
Nearest Unigene:Hs.522334
Nearest Refseq:NM_153366
Nearest Ensembl:ENSG00000165124
Gene Name:sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
Gene Alias:C9orf13|CCP22|POLYDOM|SEL-OB|SELOB
Gene Description:sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
Gene Type:protein-coding
CpG%:0.03
GC%:0.542289
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):