Difference between revisions of "TSS:Hg 101977.1"
From referenceTSS
| Line 34: | Line 34: | ||
|start_of_center_position=111038947 | |start_of_center_position=111038947 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_001351399 | + | |transcript_name=NM_001387476.1 NM_001387470.1 NM_001387472.1 NM_001387473.1 NM_001351398.2 NM_001387474.1 NM_001351399.2 NM_001387475.1 NM_001351397.2 NM_001387471.1 NM_001387520.1 NM_001387519.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101977.1 | |tss_id=hg_101977.1 | ||
Latest revision as of 18:17, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 111038947 |
|---|---|
| End of the center position in the TSS region: | 111038948 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001387476.1 NM_001387470.1 NM_001387472.1 NM_001387473.1 NM_001351398.2 NM_001387474.1 NM_001351399.2 NM_001387475.1 NM_001351397.2 NM_001387471.1 NM_001387520.1 NM_001387519.1 |
|---|---|
| Distance: | -23 |
| Num_trans: | 21 |
| All_trans: | NM_001351399:-23 NM_001351398:-23 NM_001351397:-23 NM_001351400:180 NM_001351401:180 NM_001351402:180 NM_001351404:180 NM_001351403:180 NM_001351405:180 AK298590:219 AK290287:-271 NM_001351414:450 NM_001351413:450 NM_001351412:450 NM_001351411:450 NM_001351410:450 NM_001351409:450 NM_001351408:450 NM_001351407:450 NM_001351406:450 ENST00000441240.1:462 |
TATA-Box annotation
| Distance to TSS: | 51 |
|---|---|
| Nearest PromoterID: | NM_001351397 |
| Entrez ID: | 1902 |
| Nearest Unigene: | Hs.126667 |
| Nearest Refseq: | NM_001401 |
| Nearest Ensembl: | ENSG00000198121 |
| Gene Name: | lysophosphatidic acid receptor 1 |
| Gene Alias: | EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 |
| Gene Description: | lysophosphatidic acid receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
