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Difference between revisions of "TSS:Hg 102068.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000343327.6:0 CR749471:0 AK001685:0 AK302558:0 ENST00000450374.1:-23 ENST00000487997.1:26 ENST00000374257.6:-28 NM_001244896:-28 NM_001244897:-28 NM_005156:-28 NM_001163788:-28 NM_001375920:-28 NM_001375918:-28 BC039896:-29 ENST00000374255.6:-34 ENST00000334318.10:-73 NM_001163790:-73 LF354993:147 MA590570:147
+
|all_trans=HGNC:10253
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.11
 
|cpg_percent=0.11
Line 22: Line 22:
 
|nearest_refseq=NM_005156
 
|nearest_refseq=NM_005156
 
|nearest_unigene=Hs.269988
 
|nearest_unigene=Hs.269988
|num_trans=19
+
|num_trans=9991
 
|species=human
 
|species=human
 
|start=112333571
 
|start=112333571

Latest revision as of 18:19, 19 July 2021

Basic information about the TSS


TSS ID:hg_102068.1
Species:human
Chr:chr9
TSS Classification:yes
Start:112333571
End:112333591
Strand:-
TSS Score:1
Start of the center position in the TSS region:112333581
End of the center position in the TSS region:112333582



Gene and protein annotation


Transcript_name:ENST00000343327.6 CR749471 AK001685 AK302558
Distance:0
GeneID:9991
HGNC/MGI_ID:HGNC:10253
UniProt_ID:O95758
Gene_name:polypyrimidine tract binding protein 3
Gene_symbol:PTBP3
Gene_synonyms:DKFZp781I1117
Gene_source:HGNC:10253



Transcript annotation


Transcript_name:ENST00000343327.6 CR749471 AK001685 AK302558
Distance:0
Num_trans:9991
All_trans:HGNC:10253



TATA-Box annotation


Distance to TSS:38
Nearest PromoterID:NM_001244897
Entrez ID:9991
Nearest Unigene:Hs.269988
Nearest Refseq:NM_005156
Nearest Ensembl:ENSG00000119314
Gene Name:polypyrimidine tract binding protein 3
Gene Alias:ROD1
Gene Description:polypyrimidine tract binding protein 3
Gene Type:protein-coding
CpG%:0.11
GC%:0.741294
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):