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Difference between revisions of "TSS:Hg 102294.1"

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Line 2: Line 2:
 
|Cep215=
 
|Cep215=
 
|MCPH3=
 
|MCPH3=
|all_trans=ENST00000473282.6:16 ENST00000480112.5:16 BC136275:16 BC143732:16 BC143734:16 BC143755:16 BC143760:16 BC143762:16 BC143753:16 BC143764:16 ENST00000481266.1:-24 AB489151:40 DQ581824:44 AF448860:-83 BC146782:-102 AB046853:-102 BC019577:-103 BX537421:-117 ENST00000360190.8:-121 AL833481:-121 BX537759:-121 AK122913:-122 BX537708:-122 ENST00000349780.9:-130 NR_073555:-130 NM_001011649:-130 NR_073554:-130 NR_073557:-130 NR_073558:-130 NR_073556:-130 NM_018249:-130 ENST00000360822.7:-133 ENST00000491334.1:-133 NM_001272039:-133 KP294527:-133
+
|all_trans=HGNC:18672
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.085
 
|cpg_percent=0.085
Line 24: Line 24:
 
|nearest_refseq=NM_018249
 
|nearest_refseq=NM_018249
 
|nearest_unigene=Hs.269560
 
|nearest_unigene=Hs.269560
|num_trans=35
+
|num_trans=55755
 
|species=human
 
|species=human
 
|start=120580020
 
|start=120580020

Latest revision as of 18:24, 19 July 2021

Basic information about the TSS


TSS ID:hg_102294.1
Species:human
Chr:chr9
TSS Classification:yes
Start:120580020
End:120580037
Strand:-
TSS Score:1
Start of the center position in the TSS region:120580028
End of the center position in the TSS region:120580029



Gene and protein annotation


Transcript_name:ENST00000473282.6 ENST00000480112.5 BC136275 BC143732 BC143734 BC143755 BC143760 BC143762 BC143753 BC143764
Distance:16
GeneID:55755
HGNC/MGI_ID:HGNC:18672
UniProt_ID:B7ZLE9 B9EG74 F8WCI3 F8WF55
Gene_name:CDK5 regulatory subunit associated protein 2
Gene_symbol:CDK5RAP2
Gene_synonyms:C48 CEP215 FLJ10867
Gene_source:HGNC:18672



Transcript annotation


Transcript_name:ENST00000473282.6 ENST00000480112.5 BC136275 BC143732 BC143734 BC143755 BC143760 BC143762 BC143753 BC143764
Distance:16
Num_trans:55755
All_trans:HGNC:18672



TATA-Box annotation


Distance to TSS:138
Nearest PromoterID:NR_073557
Entrez ID:55755
Nearest Unigene:Hs.269560
Nearest Refseq:NM_018249
Nearest Ensembl:ENSG00000136861
Gene Name:CDK5 regulatory subunit associated protein 2
Gene Alias:C48|Cep215|MCPH3
Gene Description:CDK5 regulatory subunit associated protein 2
Gene Type:protein-coding
CpG%:0.085
GC%:0.661692
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):