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Difference between revisions of "TSS:Hg 102295.1"

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Line 2: Line 2:
 
|Cep215=
 
|Cep215=
 
|MCPH3=
 
|MCPH3=
|all_trans=BC146782:-3 AB046853:-3 BC019577:-4 AF448860:6 BX537421:-18 ENST00000360190.8:-22 AL833481:-22 BX537759:-22 AK122913:-23 BX537708:-23 ENST00000349780.9:-31 NR_073555:-31 NM_001011649:-31 NR_073554:-31 NR_073557:-31 NR_073558:-31 NR_073556:-31 NM_018249:-31 ENST00000360822.7:-34 ENST00000491334.1:-34 NM_001272039:-34 KP294527:-34 ENST00000481266.1:65 ENST00000473282.6:121 ENST00000480112.5:121 BC136275:121 BC143732:121 BC143734:121 BC143755:121 BC143760:121 BC143762:121 BC143753:121 BC143764:121 AB489151:145 DQ581824:149
+
|all_trans=HGNC:18672
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.115
 
|cpg_percent=0.115
Line 24: Line 24:
 
|nearest_refseq=NM_018249
 
|nearest_refseq=NM_018249
 
|nearest_unigene=Hs.269560
 
|nearest_unigene=Hs.269560
|num_trans=35
+
|num_trans=55755
 
|species=human
 
|species=human
 
|start=120580125
 
|start=120580125

Latest revision as of 18:24, 19 July 2021

Basic information about the TSS


TSS ID:hg_102295.1
Species:human
Chr:chr9
TSS Classification:yes
Start:120580125
End:120580136
Strand:-
TSS Score:1
Start of the center position in the TSS region:120580130
End of the center position in the TSS region:120580131



Gene and protein annotation


Transcript_name:BC146782 AB046853
Distance:-3
GeneID:55755
HGNC/MGI_ID:HGNC:18672
UniProt_ID:
Gene_name:CDK5 regulatory subunit associated protein 2
Gene_symbol:CDK5RAP2
Gene_synonyms:C48 CEP215 FLJ10867
Gene_source:HGNC:18672



Transcript annotation


Transcript_name:BC146782 AB046853
Distance:-3
Num_trans:55755
All_trans:HGNC:18672



TATA-Box annotation


Distance to TSS:36
Nearest PromoterID:NR_073557
Entrez ID:55755
Nearest Unigene:Hs.269560
Nearest Refseq:NM_018249
Nearest Ensembl:ENSG00000136861
Gene Name:CDK5 regulatory subunit associated protein 2
Gene Alias:C48|Cep215|MCPH3
Gene Description:CDK5 regulatory subunit associated protein 2
Gene Type:protein-coding
CpG%:0.115
GC%:0.701493
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):