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Difference between revisions of "TSS:Hg 102469.1"

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{{TSSDetail
 
{{TSSDetail
 
|PP6C=
 
|PP6C=
|all_trans=X92972:0 AK295752:-11 AF035158:20 KJ891876:20 BT019708:20 AB385530:20 KU178271:20 KU178272:20 AK312332:-23 ENST00000456642.1:-35 BC006990:-38 AK316527:-44 ENST00000373547.9:-55 NM_002721:-55 AK299087:-55 AK295190:-55 ENST00000415905.5:-191 ENST00000451402.5:-191 NM_001123369:-191 NM_001123355:-191
+
|all_trans=HGNC:9323
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.12
 
|cpg_percent=0.12
Line 23: Line 23:
 
|nearest_refseq=NM_002721
 
|nearest_refseq=NM_002721
 
|nearest_unigene=Hs.744091
 
|nearest_unigene=Hs.744091
|num_trans=20
+
|num_trans=5537
 
|species=human
 
|species=human
 
|start=125189737
 
|start=125189737

Latest revision as of 18:27, 19 July 2021

Basic information about the TSS


TSS ID:hg_102469.1
Species:human
Chr:chr9
TSS Classification:yes
Start:125189737
End:125189748
Strand:-
TSS Score:1
Start of the center position in the TSS region:125189742
End of the center position in the TSS region:125189743



Gene and protein annotation


Transcript_name:X92972
Distance:0
GeneID:5537
HGNC/MGI_ID:HGNC:9323
UniProt_ID:
Gene_name:protein phosphatase 6 catalytic subunit
Gene_symbol:PPP6C
Gene_synonyms:PP6
Gene_source:HGNC:9323



Transcript annotation


Transcript_name:X92972
Distance:0
Num_trans:5537
All_trans:HGNC:9323



TATA-Box annotation


Distance to TSS:60
Nearest PromoterID:NM_002721
Entrez ID:5537
Nearest Unigene:Hs.744091
Nearest Refseq:NM_002721
Nearest Ensembl:ENSG00000119414
Gene Name:protein phosphatase 6 catalytic subunit
Gene Alias:PP6|PP6C
Gene Description:protein phosphatase 6 catalytic subunit
Gene Type:protein-coding
CpG%:0.12
GC%:0.651741
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):