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Difference between revisions of "TSS:Hg 102540.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000361436.10:24 NM_000976:24 ENST00000497825.5:25 ENST00000497322.1:25 AK026526:25 AK057602:25 BC105603:25 D28443:25 AF037643:28 BC008230:36 BC050644:45 L06505:45 BC094831:50 ENST00000536368.1:57 BC059950:57 KJ901711:112
+
|all_trans=HGNC:10302
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 22: Line 22:
 
|nearest_refseq=NM_000976
 
|nearest_refseq=NM_000976
 
|nearest_unigene=Hs.408054
 
|nearest_unigene=Hs.408054
|num_trans=16
+
|num_trans=6136
 
|species=human
 
|species=human
 
|start=127451429
 
|start=127451429
 
|start_of_center_position=127451433
 
|start_of_center_position=127451433
 
|strand=-
 
|strand=-
|transcript_name=ENST00000361436.10 NM_000976
+
|transcript_name=ENST00000361436.10
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_102540.1
 
|tss_id=hg_102540.1

Latest revision as of 18:29, 19 July 2021

Basic information about the TSS


TSS ID:hg_102540.1
Species:human
Chr:chr9
TSS Classification:yes
Start:127451429
End:127451438
Strand:-
TSS Score:1
Start of the center position in the TSS region:127451433
End of the center position in the TSS region:127451434



Gene and protein annotation


Transcript_name:ENST00000361436.10
Distance:24
GeneID:6136
HGNC/MGI_ID:HGNC:10302
UniProt_ID:P30050
Gene_name:ribosomal protein L12
Gene_symbol:RPL12
Gene_synonyms:L12
Gene_source:HGNC:10302



Transcript annotation


Transcript_name:ENST00000361436.10
Distance:24
Num_trans:6136
All_trans:HGNC:10302



TATA-Box annotation


Distance to TSS:-28
Nearest PromoterID:NM_000976
Entrez ID:6136
Nearest Unigene:Hs.408054
Nearest Refseq:NM_000976
Nearest Ensembl:ENSG00000197958
Gene Name:ribosomal protein L12
Gene Alias:L12
Gene Description:ribosomal protein L12
Gene Type:protein-coding
CpG%:0.105
GC%:0.616915
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):