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Difference between revisions of "TSS:Hg 102642.1"

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Line 2: Line 2:
 
|EEIG1=
 
|EEIG1=
 
|SYM-3A=
 
|SYM-3A=
|all_trans=LP896559:139 AK058004:139 ENST00000494606.1:211 ENST00000373095.6:-296 NM_001035254:-296
+
|all_trans=HGNC:31419
 
|bA203J24.7=
 
|bA203J24.7=
 
|chr=chr9
 
|chr=chr9
Line 25: Line 25:
 
|nearest_refseq=NM_203305
 
|nearest_refseq=NM_203305
 
|nearest_unigene=Hs.535972
 
|nearest_unigene=Hs.535972
|num_trans=5
+
|num_trans=399665
 
|species=human
 
|species=human
 
|start=127980671
 
|start=127980671
 
|start_of_center_position=127980682
 
|start_of_center_position=127980682
 
|strand=-
 
|strand=-
|transcript_name=LP896559 AK058004
+
|transcript_name=AK058004
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_102642.1
 
|tss_id=hg_102642.1

Latest revision as of 18:31, 19 July 2021

Basic information about the TSS


TSS ID:hg_102642.1
Species:human
Chr:chr9
TSS Classification:yes
Start:127980671
End:127980693
Strand:-
TSS Score:1
Start of the center position in the TSS region:127980682
End of the center position in the TSS region:127980683



Gene and protein annotation


Transcript_name:AK058004
Distance:139
GeneID:399665
HGNC/MGI_ID:HGNC:31419
UniProt_ID:
Gene_name:family with sequence similarity 102 member A
Gene_symbol:FAM102A
Gene_synonyms:Eeig1 SYM-3A bA203J24.7
Gene_source:HGNC:31419



Transcript annotation


Transcript_name:AK058004
Distance:139
Num_trans:399665
All_trans:HGNC:31419



TATA-Box annotation


Distance to TSS:307
Nearest PromoterID:NM_001035254
Entrez ID:399665
Nearest Unigene:Hs.535972
Nearest Refseq:NM_203305
Nearest Ensembl:ENSG00000167106
Gene Name:family with sequence similarity 102 member A
Gene Alias:C9orf132|EEIG1|SYM-3A|bA203J24.7
Gene Description:family with sequence similarity 102 member A
Gene Type:protein-coding
CpG%:0.115
GC%:0.81592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):