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Difference between revisions of "TSS:Hg 102684.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000610329.4:0 NM_004486:0 NM_001366244:0 NM_001366246:0 BX647920:0 AF248953:0 KJ901459:0 CU686726:0 ENST00000490628.2:-16 ENST00000421699.7:-18 ENST00000611957.4:-18 BC069268:-18 ENST00000450617.6:-24
+
|all_trans=HGNC:4425
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 22: Line 22:
 
|nearest_refseq=NM_004486
 
|nearest_refseq=NM_004486
 
|nearest_unigene=Hs.155827
 
|nearest_unigene=Hs.155827
|num_trans=13
+
|num_trans=2801
 
|species=human
 
|species=human
 
|start=128275935
 
|start=128275935
 
|start_of_center_position=128275953
 
|start_of_center_position=128275953
 
|strand=-
 
|strand=-
|transcript_name=ENST00000610329.4 NM_004486 NM_001366244 NM_001366246 BX647920 AF248953 KJ901459 CU686726
+
|transcript_name=ENST00000610329.4 BX647920 AF248953 CU686726
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_102684.1
 
|tss_id=hg_102684.1

Latest revision as of 18:32, 19 July 2021

Basic information about the TSS


TSS ID:hg_102684.1
Species:human
Chr:chr9
TSS Classification:yes
Start:128275935
End:128275971
Strand:-
TSS Score:1
Start of the center position in the TSS region:128275953
End of the center position in the TSS region:128275954



Gene and protein annotation


Transcript_name:ENST00000610329.4 BX647920 AF248953 CU686726
Distance:0
GeneID:2801
HGNC/MGI_ID:HGNC:4425
UniProt_ID:A0A087WYC0 Q08379 Q5HYE0
Gene_name:golgin A2
Gene_symbol:GOLGA2
Gene_synonyms:GM130 golgin-95
Gene_source:HGNC:4425



Transcript annotation


Transcript_name:ENST00000610329.4 BX647920 AF248953 CU686726
Distance:0
Num_trans:2801
All_trans:HGNC:4425



TATA-Box annotation


Distance to TSS:-1
Nearest PromoterID:NM_001366244
Entrez ID:2801
Nearest Unigene:Hs.155827
Nearest Refseq:NM_004486
Nearest Ensembl:ENSG00000167110
Gene Name:golgin A2
Gene Alias:GM130
Gene Description:golgin A2
Gene Type:protein-coding
CpG%:0.105
GC%:0.671642
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):