Difference between revisions of "TSS:Hg 102712.1"
From referenceTSS
| Line 3: | Line 3: | ||
|KAT1= | |KAT1= | ||
|KATI= | |KATI= | ||
| − | |all_trans= | + | |all_trans=HGNC:1564 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_004059 | |nearest_refseq=NM_004059 | ||
|nearest_unigene=Hs.495250 | |nearest_unigene=Hs.495250 | ||
| − | |num_trans= | + | |num_trans=883 |
|species=human | |species=human | ||
|start=128881923 | |start=128881923 | ||
| Line 31: | Line 31: | ||
|strand=- | |strand=- | ||
|tata_box=-25(CCCCCTTAAAGG,-,0.00),-24(CCCCTTAAAGGG,+,0.00),-24(CCCCTTAAAGGG,-,0.00),-23(CCCTTAAAGGGA,+,0.00),-22(CCTTAAAGGGAC,+,0.00) | |tata_box=-25(CCCCCTTAAAGG,-,0.00),-24(CCCCTTAAAGGG,+,0.00),-24(CCCCTTAAAGGG,-,0.00),-23(CCCTTAAAGGGA,+,0.00),-22(CCTTAAAGGGAC,+,0.00) | ||
| − | |transcript_name= | + | |transcript_name=ENST00000302586.8 ENST00000320665.10 ENST00000436267.7 ENST00000474824.1 BC033685 AK297995 AK314427 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102712.1 | |tss_id=hg_102712.1 | ||
Latest revision as of 18:33, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 128881947 |
|---|---|
| End of the center position in the TSS region: | 128881948 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000302586.8 ENST00000320665.10 ENST00000436267.7 ENST00000474824.1 BC033685 AK297995 AK314427 |
|---|---|
| Distance: | 0 |
| Num_trans: | 883 |
| All_trans: | HGNC:1564 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_004059 |
| Entrez ID: | 883 |
| Nearest Unigene: | Hs.495250 |
| Nearest Refseq: | NM_004059 |
| Nearest Ensembl: | ENSG00000171097 |
| Gene Name: | kynurenine aminotransferase 1 |
| Gene Alias: | CCBL1|GTK|KAT1|KATI |
| Gene Description: | kynurenine aminotransferase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -25(CCCCCTTAAAGG,-,0.00),-24(CCCCTTAAAGGG,+,0.00),-24(CCCCTTAAAGGG,-,0.00),-23(CCCTTAAAGGGA,+,0.00),-22(CCTTAAAGGGAC,+,0.00) |
