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Difference between revisions of "TSS:Hg 102713.1"

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Line 3: Line 3:
 
|KAT1=
 
|KAT1=
 
|KATI=
 
|KATI=
−
|all_trans=ENST00000462722.5:0 NM_001352991:0 NM_001352994:0 NM_001352992:0 NM_001287390:0 NM_001352997:0 NM_001122671:0 NM_001352990:0 NM_001352995:0 NM_001122672:0 NM_001352996:0 NM_001352999:0 NM_001352998:0 NR_109829:0 NR_148224:0 BC021262:0 AK291178:0 BC022468:0 ENST00000302586.8:78 NM_004059:78 ENST00000474824.1:83 AK314427:84 ENST00000651925.1:97 ENST00000436267.7:97 AK297995:97 ENST00000320665.10:99 BC033685:99 LF346616:-390 MA582193:-390 ENST00000451800.5:-405 NM_001352989:-434 NM_001352988:-434
+
|all_trans=HGNC:1564
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.12
 
|cpg_percent=0.12
Line 25: Line 25:
 
|nearest_refseq=NM_004059
 
|nearest_refseq=NM_004059
 
|nearest_unigene=Hs.495250
 
|nearest_unigene=Hs.495250
−
|num_trans=32
+
|num_trans=883
 
|species=human
 
|species=human
 
|start=128882027
 
|start=128882027
Line 31: Line 31:
 
|strand=-
 
|strand=-
 
|tata_box=86(CCCCCTTAAAGG,-,0.00),87(CCCCTTAAAGGG,+,0.00),87(CCCCTTAAAGGG,-,0.00),88(CCCTTAAAGGGA,+,0.00),89(CCTTAAAGGGAC,+,0.00)
 
|tata_box=86(CCCCCTTAAAGG,-,0.00),87(CCCCTTAAAGGG,+,0.00),87(CCCCTTAAAGGG,-,0.00),88(CCCTTAAAGGGA,+,0.00),89(CCTTAAAGGGAC,+,0.00)
−
|transcript_name=ENST00000462722.5 NM_001352991 NM_001352994 NM_001352992 NM_001287390 NM_001352997 NM_001122671 NM_001352990 NM_001352995 NM_001122672 NM_001352996 NM_001352999 NM_001352998 NR_109829 NR_148224 BC021262 AK291178 BC022468
+
|transcript_name=ENST00000462722.5 BC021262 AK291178 BC022468
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_102713.1
 
|tss_id=hg_102713.1

Latest revision as of 18:33, 19 July 2021

Basic information about the TSS

TSS ID:hg_102713.1
Species:human
Chr:chr9
TSS Classification:yes
Start:128882027
End:128882089
Strand:-
TSS Score:1
Start of the center position in the TSS region:128882058
End of the center position in the TSS region:128882059



Gene and protein annotation

Transcript_name:ENST00000462722.5 BC021262 AK291178 BC022468
Distance:0
GeneID:883
HGNC/MGI_ID:HGNC:1564
UniProt_ID:B7Z4W5 Q16773
Gene_name:kynurenine aminotransferase 1
Gene_symbol:KYAT1
Gene_synonyms:GTK KATI
Gene_source:HGNC:1564



Transcript annotation

Transcript_name:ENST00000462722.5 BC021262 AK291178 BC022468
Distance:0
Num_trans:883
All_trans:HGNC:1564



TATA-Box annotation

Distance to TSS:17
Nearest PromoterID:NM_001352991
Entrez ID:883
Nearest Unigene:Hs.495250
Nearest Refseq:NM_004059
Nearest Ensembl:ENSG00000171097
Gene Name:kynurenine aminotransferase 1
Gene Alias:CCBL1|GTK|KAT1|KATI
Gene Description:kynurenine aminotransferase 1
Gene Type:protein-coding
CpG%:0.12
GC%:0.671642
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):86(CCCCCTTAAAGG,-,0.00),87(CCCCTTAAAGGG,+,0.00),87(CCCCTTAAAGGG,-,0.00),88(CCCTTAAAGGGA,+,0.00),89(CCTTAAAGGGAC,+,0.00)
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