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Difference between revisions of "TSS:Hg 102726.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|CAT1=
 
|CAT1=
|all_trans=ENST00000679716.1:-321
+
|all_trans=HGNC:2342
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 23: Line 23:
 
|nearest_refseq=NM_000755
 
|nearest_refseq=NM_000755
 
|nearest_unigene=Hs.12068
 
|nearest_unigene=Hs.12068
|num_trans=1
+
|num_trans=1384
 
|species=human
 
|species=human
 
|start=129108124
 
|start=129108124

Latest revision as of 18:33, 19 July 2021

Basic information about the TSS


TSS ID:hg_102726.1
Species:human
Chr:chr9
TSS Classification:no
Start:129108124
End:129108137
Strand:-
TSS Score:1
Start of the center position in the TSS region:129108130
End of the center position in the TSS region:129108131



Gene and protein annotation


Transcript_name:ENST00000679716.1
Distance:-321
GeneID:1384
HGNC/MGI_ID:HGNC:2342
UniProt_ID:
Gene_name:carnitine O-acetyltransferase
Gene_symbol:CRAT
Gene_synonyms:CAT1
Gene_source:HGNC:2342



Transcript annotation


Transcript_name:ENST00000679716.1
Distance:-321
Num_trans:1384
All_trans:HGNC:2342



TATA-Box annotation


Distance to TSS:2662
Nearest PromoterID:NM_001346549
Entrez ID:1384
Nearest Unigene:Hs.12068
Nearest Refseq:NM_000755
Nearest Ensembl:ENSG00000095321
Gene Name:carnitine O-acetyltransferase
Gene Alias:CAT|CAT1|NBIA8
Gene Description:carnitine O-acetyltransferase
Gene Type:protein-coding
CpG%:0.01
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):